Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2113 ATGCCTGCAAGAAAACCACAGCCACTAATTGCTGCAAGGAGGCCAGACTCCGGTGGCAAAGAAGGCTCTGCAATCTCTCTCCTTGCTAACCACTTTCTAGTGAAGTTTGATTCATCACAAAAAATATATCATTACAATGTTGAAATTAGTCCCCATCCCTCTAAACAAGTTGCCCGAGTAATCAAAGAGAAGCTTGTTGATAATAATTCTGCTGTGCTCTCTGGTGCTCTTCCGGCATACGATGGGCAGAAGAATCTTTATAGCTCCGTTGAATTCCAAAATGATAAGCTTGAGTTCTACGTGAGCCTGCCAATCCCAGCAAGCAAAAGTTCATTAAATGATAGAGAAATGTGTGAATTGAAAGAGAAGCATGAACAGCATAAACTATTCCGGATAAATATCAAACTAGTCTCTAAGATCAATGGGAAGGAGTTGGCAAAATACTTGGGCAAAGAGGAAGATGATGATTGGATTCCACTTCCACAGGATTATCTCCATGCTTTGGATGTAGTTCTGAGGGATAGTCCAACTGAGAAGTGTATACCAGCAGGTAGGTCTTTCTATTCAACTTCAATGGGAAGAACCAAAGAGATTGGGGGAGGAGCTACTGGGTTGAGAGGGTTCTTTCAGAGTCTTCGACCAACTCAACAAGGACTTGCCCTCAATGTTGATTTTTCTGTAACTGCTTTCCATGAGAGCATAGGAGTGATTCCATACTTGCAGAAGCGCCTTGAGTTCCTTCGAGATCTTTCTCAAAGGAAGATGACAAGTTTAACTGGTGAAGAGAGGAAAGAAGTGGAGAAGGCCTTGAAGAACATAAGGGTCTTTGTTTGTCATAGACAAACTGTGCAGAGATATCGTGTCTATGGCTTAACTGAAGAGACTACTGAAAATCTTTGGTTTACTGATAGGGATGGAAAGAATCTGAGGCTCGTTGGCTATTTTAAAGATCACTATACCTATGACATACAATTTAACAAATTGCCATGCTTGCAGATTAGTAGGAGTAAACCATGTTATCTTCCTATGGAGCTTTGTGTCATCTGTGAAGGCCAGAAATTCCTTGGAAAGCTTTCTGATGACCAGACTGCAAAAATACTCAAGATGGGCTGCCAAAGACCAAGAGAACGAAAAGCCATCATTGAAGGAGTCATGAGGGGGCCTGTTGGGCCAACTAGGAATCATTTTGGCAGTGGCAACCAGGAAAGAGAATTCAACCTCCAGGTGTCAAGAGAAATGACTCGTTTATCTGGGAGAATTCTTCACCCTCCCAAGCTAAAGCTTGGGGATGGAGGTCACATGACAAAGCTAATTCCTTCACGGCATGACCGCCAGTGGAACCTTCTAGACGGTCAAGTCTTTGAGGGAACTAAAATTGAAAGGTGGGCATTGATAGGTTTCGGTGGTACACCTGAGCAGAAGTCCAATATCCCTAGATTTATAAGCCGGCTATCTCAAAGGTGTGAAGAAATGGGCATTTTTCTTAACAAGAACACAATTGTTAGGCCCCATTTTGAATCAGCCCAGGTGCTTAATAATGTCTCTCTTCTGGAATCTAAGCTTGAGAAAATCCAGAGAACTGCCTCAAACAATCTGCAGCTGCTTATTTGTGTTATGGAGAGAAAACACAAAGGATATGCAGACTTGAAAAGAATTGCAGAGACAAGTATTGGAGTTATGAGCCAATGCTGCTTGTATCCGAATCTCAGCAAATTAAGCTCACAATTTTTGGCAAATTTGGCTCTCAAAATCAATGCCAAAGTTGGTGGCTGCACAGTTGCTCTGTACAATTCACTGCCATCTCAGATTCCAAGACTCTTTCAATATGATGAACCAGTTATATTTATGGGTGCTGATGTAACTCATCCCCATCCACTTGATGATCACAGTCCATCTGTTGCTGCTGTTGTTGGTAGCATGAATTGGCCTACTGCAAACAAATATATTTCAAGAATAAGGTCGCAAACGCATCGACATGAAATCATTCATGATCTCGGTGCAATGGTGAAGGAGTTACTAGATGATTTCTATCAGGAAGTAAAGAAACTCCCTGGGAGAATAATTTTCTTTAGAGATGGGGTTAGTGAAACCCAGTTCTATAGAGTTCTTCAAGATGAACTACAATCCATCAAAGGGGCATGTTCTAGATTTGTTGGTTATAAACCATTAGTTACTTTTGTAGTAGTACAGAAAAGGCATCACACAAGATTGTTTCCCTTTGAAACTGATCATCATTGTCACGAGAATATTCCCCCAGGGACTGTGGTTGACTCTGTGATCACTCATCCCAGAGAGTTTGACTTTTATCTTTGCAGCCACTGGGGCATGAAAGGAACAAGCAGGCCAACTCATTACCATGTTTTGTGGGATGAAAACAAGTTTACTTCTGATGAACTCCAAAAGCTGGTTTATAACCTGTGCTATACTTTTGTTAGATGCACCAAGCCAATTTCTTTGGTTCCTCCTGCTTATTATGCCCATTTAGCTGCATACAGAGGCAGACTCTATCTTGACAGATCAGATTATTCATCGACTTTATCCAAAGGTATTTCTTCATTATCTAGACCTGCACCTCCAAAGACAGCACCTCTTCCAAAACTTAATGAGAACATCAAGAAGCTCATGTTCTACTGCTAA 2637 0.4145 MPARKPQPLIAARRPDSGGKEGSAISLLANHFLVKFDSSQKIYHYNVEISPHPSKQVARVIKEKLVDNNSAVLSGALPAYDGQKNLYSSVEFQNDKLEFYVSLPIPASKSSLNDREMCELKEKHEQHKLFRINIKLVSKINGKELAKYLGKEEDDDWIPLPQDYLHALDVVLRDSPTEKCIPAGRSFYSTSMGRTKEIGGGATGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKMTSLTGEERKEVEKALKNIRVFVCHRQTVQRYRVYGLTEETTENLWFTDRDGKNLRLVGYFKDHYTYDIQFNKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTAKILKMGCQRPRERKAIIEGVMRGPVGPTRNHFGSGNQEREFNLQVSREMTRLSGRILHPPKLKLGDGGHMTKLIPSRHDRQWNLLDGQVFEGTKIERWALIGFGGTPEQKSNIPRFISRLSQRCEEMGIFLNKNTIVRPHFESAQVLNNVSLLESKLEKIQRTASNNLQLLICVMERKHKGYADLKRIAETSIGVMSQCCLYPNLSKLSSQFLANLALKINAKVGGCTVALYNSLPSQIPRLFQYDEPVIFMGADVTHPHPLDDHSPSVAAVVGSMNWPTANKYISRIRSQTHRHEIIHDLGAMVKELLDDFYQEVKKLPGRIIFFRDGVSETQFYRVLQDELQSIKGACSRFVGYKPLVTFVVVQKRHHTRLFPFETDHHCHENIPPGTVVDSVITHPREFDFYLCSHWGMKGTSRPTHYHVLWDENKFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLDRSDYSSTLSKGISSLSRPAPPKTAPLPKLNENIKKLMFYC 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2113 878 FunFam Protein argonaute 7 228 354 - -
Prci10g2113 878 MobiDBLite consensus disorder prediction 1 20 - -
Prci10g2113 878 SUPERFAMILY Ribonuclease H-like 519 838 IPR012337 -
Prci10g2113 878 Pfam Piwi domain 535 834 IPR003165 GO:0003676
Prci10g2113 878 SUPERFAMILY PAZ domain 228 386 IPR036085 GO:0005515
Prci10g2113 878 CDD PAZ_argonaute_like 237 349 - -
Prci10g2113 878 Pfam N-terminal domain of argonaute 24 172 IPR032474 -
Prci10g2113 878 ProSiteProfiles Piwi domain profile. 534 838 IPR003165 GO:0003676
Prci10g2113 878 Pfam Argonaute linker 1 domain 183 231 IPR014811 -
Prci10g2113 878 SMART DUF1785_2 181 233 IPR014811 -
Prci10g2113 878 Gene3D paz domain 227 354 - -
Prci10g2113 878 SMART Piwi_a_2 534 838 IPR003165 GO:0003676
Prci10g2113 878 Pfam PAZ domain 245 366 IPR003100 GO:0005515
Prci10g2113 878 ProSiteProfiles PAZ domain profile. 241 350 IPR003100 GO:0005515
Prci10g2113 878 Gene3D - 606 878 IPR036397 GO:0003676
Prci10g2113 878 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 19 839 - -
Prci10g2113 878 Gene3D - 420 596 - -
Prci10g2113 878 FunFam Argonaute 10 420 596 - -
Prci10g2113 878 CDD Piwi_ago-like 403 837 IPR045246 -
Prci10g2113 878 SMART PAZ_2_a_3 241 381 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2113 Prci-Chr10 26228020 26232971 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2113 19 878 Eukaryotic Initiation Factors Gene Family AT1G48410 41.648 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2113 K11593 - gmx:100797755 1519.21