Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2112 ATGCTATGCATGTGGGATCCACTTCCATCTCCAAAGGAGTCTCATCATCAAGCCAAGGCCTCTTCCGAAGGAGATGATAGGAACAAACTCATGCCTGCAAGAAAACCACAGCCACTAATTGCTGCAAGGAGGCCAGACTCCGGTGGCAAAGAAGGCTCTGCAATCTCTCTCCTTGCTAACCACTTTCTAGTGAAGTTTGATTCATCACAAAAAATATATCATTACAATGTTGAAATTAGTCCCCATCCCTCTAAACAAGTTGCCCGAGTAATCAAAGAGAAGCTTGTTGATAATAATTCTGCTGTGCTCTCTGGTGCTCTTCCGGCATACGATGGGCAGAAGAATCTTTATAGCTCCGTTGAATTCCAAAATGATAAGCTTGAGTTCTACGTGAGCCTGCCAATCCCAGCAAGCAAAAGTTCATTAAATGATAGAGAAATGTGTGAATTGAAAGAGAAGCATGAACAGCATAAACTATTCCGGATAAATATCAAACTAGTCTCTAAGATCAATGGGAAGGAGTTGGCAAAATACTTGGGCAAAGAGGAAGATGATGATTGGATTCCACTTCCACAGGATTATCTCCATGCTTTGGATGTAGTTCTGAGGGATAGTCCAACTGAGAAGTGTATACCAGCAGGTAGGTCTTTCTATTCAACTTCAATGGGAAGAACCAAAGAGATTGGGGGAGGAGCTACTGGGTTGAGAGGGTTCTTTCAGAGTCTTCGACCAACTCAACAAGGACTTGCCCTCAATGTTGATTTTTCTGTAACTGCTTTCCATGAGAGCATAGGAGTGATTCCATACTTGCAGAAGCGCCTTGAGTTCCTTCGAGATCTTTCTCAAAGGAAGATGACAAGTTTAACTGGTGAAGAGAGGAAAGAAGTGGAGAAGGCCTTGAAGAACATAAGGGTCTTTGTTTGTCATAGACAAACTGTGCAGAGATATCGTGTCTATGGCTTAACTGAAGAGACTACTGAAAATCTTTGGTTTACTGATAGGGATGGAAAGAATCTGAGGCTCGTTGGCTATTTTAAAGATCACTATACCTATGACATACAATTTAACAAATTGCCATGCTTGCAGATTAGTAGGAGTAAACCATGTTATCTTCCTATGGAGCTTTGTGTCATCTGTGAAGGCCAGAAATTCCTTGGAAAGCTTTCTGATGACCAGACTGCAAAAATACTCAAGATGGGCTGCCAAAGACCAAGAGAACGAAAAGCCATCATTGAAGGAGTCATGAGGGGGCCTGTTGGGCCAACTAGGAATCATTTTGGCAGTGGCAACCAGGAAAGAGAATTCAACCTCCAGGTGTCAAGAGAAATGACTCGTTTATCTGGGAGAATTCTTCACCCTCCCAAGCTAAAGCTTGGGGATGGAGGTCACATGACAAAGCTAATTCCTTCACGGCATGACCGCCAGTGGAACCTTCTAGACGGTCAAGTCTTTGAGGGAACTAAAATTGAAAGGTGGGCATTGATAGGTTTCGGTGGTACACCTGAGCAGAAGTCCAATATCCCTAGATTTATAAGCCGGCTATCTCAAAGGTGTGAAGAAATGGGCATTTTTCTTAACAAGAACACAATTGTTAGGCCCCATTTTGAATCAGCCCAGGTGCTTAATAATGTCTCTCTTCTGGAATCTAAGCTTGAGAAAATCCAGAGAACTGCCTCAAACAATCTGCAGCTGCTTATTTGTGTTATGGAGAGAAAACACAAAGGATATGCAGACTTGAAAAGAATTGCAGAGACAAGTATTGGAGTTATGAGCCAATGCTGCTTGTATCCGAATCTCAGCAAATTAAGCTCACAATTTTTGGCAAATTTGGCTCTCAAAATCAATGCCAAAGTTGGTGGCTGCACAGTTGCTCTGTACAATTCACTGCCATCTCAGATTCCAAGACTCTTTCAATATGATGAACCAGTTATATTTATGGGTGCTGATGTAACTCATCCCCATCCACTTGATGATCACAGTCCATCTGTTGCTGCTGTTGTTGGTAGCATGAATTGGCCTACTGCAAACAAATATATTTCAAGAATAAGGTCGCAAACGCATCGACATGAAATCATTCATGATCTCGGTGCAATGGTGAAGGAGTTACTAGATGATTTCTATCAGGAAGTAAAGAAACTCCCTGGGAGAATAATTTTCTTTAGAGATGGGGTTAGTGAAACCCAGTTCTATAGAGTTCTTCAAGATGAACTACAATCCATCAAAGGGGCATGTTCTAGATTTGTTGGTTATAAACCATTAGTTACTTTTGTAGTAGTACAGAAAAGGCATCACACAAGATTGTTTCCCTTTGAAACTGATCATCATTGTCACGAGAATATTCCCCCAGGGACTGTGGTTGACTCTGTGATCACTCATCCCAGAGAGTTTGACTTTTATCTTTGCAGCCACTGGGGCATGAAAGGAACAAGCAGGCCAACTCATTACCATGTTTTGTGGGATGAAAACAAGTTTACTTCTGATGAACTCCAAAAGCTGGTTTATAACCTGTGCTATACTTTTGTTAGATGCACCAAGCCAATTTCTTTGGTTCCTCCTGCTTATTATGCCCATTTAGCTGCATACAGAGGCAGACTCTATCTTGACAGATCAGATTATTCATCGACTTTATCCAAAGGTATTTCTTCATTATCTAGACCTGCACCTCCAAAGACAGCACCTCTTCCAAAACTTAATGAGAACATCAAGAAGCTCATGTTCTACTGCTAA 2727 0.4166 MLCMWDPLPSPKESHHQAKASSEGDDRNKLMPARKPQPLIAARRPDSGGKEGSAISLLANHFLVKFDSSQKIYHYNVEISPHPSKQVARVIKEKLVDNNSAVLSGALPAYDGQKNLYSSVEFQNDKLEFYVSLPIPASKSSLNDREMCELKEKHEQHKLFRINIKLVSKINGKELAKYLGKEEDDDWIPLPQDYLHALDVVLRDSPTEKCIPAGRSFYSTSMGRTKEIGGGATGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKMTSLTGEERKEVEKALKNIRVFVCHRQTVQRYRVYGLTEETTENLWFTDRDGKNLRLVGYFKDHYTYDIQFNKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTAKILKMGCQRPRERKAIIEGVMRGPVGPTRNHFGSGNQEREFNLQVSREMTRLSGRILHPPKLKLGDGGHMTKLIPSRHDRQWNLLDGQVFEGTKIERWALIGFGGTPEQKSNIPRFISRLSQRCEEMGIFLNKNTIVRPHFESAQVLNNVSLLESKLEKIQRTASNNLQLLICVMERKHKGYADLKRIAETSIGVMSQCCLYPNLSKLSSQFLANLALKINAKVGGCTVALYNSLPSQIPRLFQYDEPVIFMGADVTHPHPLDDHSPSVAAVVGSMNWPTANKYISRIRSQTHRHEIIHDLGAMVKELLDDFYQEVKKLPGRIIFFRDGVSETQFYRVLQDELQSIKGACSRFVGYKPLVTFVVVQKRHHTRLFPFETDHHCHENIPPGTVVDSVITHPREFDFYLCSHWGMKGTSRPTHYHVLWDENKFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLDRSDYSSTLSKGISSLSRPAPPKTAPLPKLNENIKKLMFYC 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2112 908 SMART DUF1785_2 211 263 IPR014811 -
Prci10g2112 908 SUPERFAMILY PAZ domain 258 416 IPR036085 GO:0005515
Prci10g2112 908 ProSiteProfiles PAZ domain profile. 271 380 IPR003100 GO:0005515
Prci10g2112 908 Gene3D - 636 908 IPR036397 GO:0003676
Prci10g2112 908 FunFam Protein argonaute 7 258 384 - -
Prci10g2112 908 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 38 869 - -
Prci10g2112 908 Gene3D - 450 626 - -
Prci10g2112 908 MobiDBLite consensus disorder prediction 12 32 - -
Prci10g2112 908 CDD Piwi_ago-like 433 867 IPR045246 -
Prci10g2112 908 Pfam Piwi domain 565 864 IPR003165 GO:0003676
Prci10g2112 908 Pfam N-terminal domain of argonaute 54 202 IPR032474 -
Prci10g2112 908 Gene3D paz domain 257 384 - -
Prci10g2112 908 SMART PAZ_2_a_3 271 411 IPR003100 GO:0005515
Prci10g2112 908 Pfam Argonaute linker 1 domain 213 261 IPR014811 -
Prci10g2112 908 Pfam PAZ domain 275 396 IPR003100 GO:0005515
Prci10g2112 908 SUPERFAMILY Ribonuclease H-like 549 868 IPR012337 -
Prci10g2112 908 CDD PAZ_argonaute_like 267 379 - -
Prci10g2112 908 MobiDBLite consensus disorder prediction 1 50 - -
Prci10g2112 908 ProSiteProfiles Piwi domain profile. 564 868 IPR003165 GO:0003676
Prci10g2112 908 SMART Piwi_a_2 564 868 IPR003165 GO:0003676
Prci10g2112 908 FunFam Argonaute 10 450 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2112 Prci-Chr10 26228013 26232971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2112 49 908 Eukaryotic Initiation Factors Gene Family AT1G48410 41.648 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2112 K11593 - gmx:100797755 1544.25