Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2105 ATGAGTTCCGATAACTCCACCTCCGGCGCCGAGTCGTCTGGCGGCTGTGCATCGGGGCTAGACAAGGACAAGCAGAAGGATAAGGCCAGGGTGAATCGCACCTCTTTGATCTTGTGGCATGCCCATCAAAACGACGCCGCTTCTGTCCGCAGGCTTCTCGAGGAGGATCGGTCGCTGGTGAACGCCAGAGATTATGACAATCGCACGCCGCTTCACGTGGTTTCTCTCCATGGTTGGGTCGAAGTTGCTAAGTGCTTGCTTGAATATGGTGCCGATGTAAACGCGCAGGATCGCTGGAGAAACACTCCTCTAGCTGATGCAGAAGGCGCTCAAAAGCTTGACATGGTGGAGCTTTTAAAATCTCATGGAGGCTTGTCTTTTGGTCAAACTGGAAGCCATTTTGAACCAAAGCCTGTTGCTCCTCCACTGCCTAACAAGTGTGATTGGGAAATAGACCCTTCTGAGCTGGACTTCACAAATTCAGTTCGCATTGGAAAGGGATCTTTTGGTGAAATTTTGAAAGCACATTGGCGTGGAACGCCTGTTGCTGTCAAACGTATTCTTCCATCTCTCTCAGATGATAGATTGGTGATCCAGGACTTCAGGCATGAGGTTAATTTGCTAGTGAAGGTTCGACACCCTAATATAGTCCAGTTTCTTGGAGCTGTAACCGAAAAGAAGCCCCTTTTGTTAATCACTGAGTATCTAAGAGGGGGTGATCTTCATCAATATCTCAAGGAAAAAGGCACACTCAGTCCTTCAACAGCTGTCAACTTTGCTTTGGATATGGCCAGAGGGATGGCCTATCTTCACAATGAACCAAATGTTATAATTCATCGAGACCTAAAGCCAAGGAATGTCCTTTTAGTCAATTCTAGTGCAGACCATTTAAAAGTTGGAGATTTTGGTCTGAGTAAGCTTATCAAGGTCAAGAATTCTCATGATGTTTATAAGATGACCGGTGAAACTGGAAGCTACCGCTATATGGCTCCTGAAGTTTTCAGACACCGGAGATATGATAAAAAGGTTGATGTGTTCTCCTTTGCTATGATTCTGTATGAGATGCTTGAAGGGGAACCACCTTTTGCAAGTTATGAACCTTATGATGCAGCCAAACAAGTAGCAGAAGGAAACAGACCAACTATTCGTGCAAAGGGTTTTACCCCTGAATTGCGACAATTAACCATTGAGTGTTGGAGTGCTGATATGAATCAAAGACCTTCCTTCTTGGAGATCCTCAAACGGCTTGAGAAGATCAAGGAAAATTTACCCGCAGATCATCACTGGCACTTGTTCTCTTCCTAA 1305 0.4552 MSSDNSTSGAESSGGCASGLDKDKQKDKARVNRTSLILWHAHQNDAASVRRLLEEDRSLVNARDYDNRTPLHVVSLHGWVEVAKCLLEYGADVNAQDRWRNTPLADAEGAQKLDMVELLKSHGGLSFGQTGSHFEPKPVAPPLPNKCDWEIDPSELDFTNSVRIGKGSFGEILKAHWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKVRHPNIVQFLGAVTEKKPLLLITEYLRGGDLHQYLKEKGTLSPSTAVNFALDMARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVKNSHDVYKMTGETGSYRYMAPEVFRHRRYDKKVDVFSFAMILYEMLEGEPPFASYEPYDAAKQVAEGNRPTIRAKGFTPELRQLTIECWSADMNQRPSFLEILKRLEKIKENLPADHHWHLFSS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2105 434 Pfam Ankyrin repeats (3 copies) 31 97 IPR002110 GO:0005515
Prci10g2105 434 SUPERFAMILY Ankyrin repeat 32 123 IPR036770 -
Prci10g2105 434 SUPERFAMILY Protein kinase-like (PK-like) 157 429 IPR011009 -
Prci10g2105 434 FunFam Integrin-linked protein kinase family 237 432 - -
Prci10g2105 434 ProSiteProfiles Ankyrin repeat profile. 66 98 IPR002110 GO:0005515
Prci10g2105 434 CDD STKc_MAP3K-like 164 416 - -
Prci10g2105 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Prci10g2105 434 SMART serkin_6 158 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2105 434 FunFam serine/threonine-protein kinase STY46-like 151 237 - -
Prci10g2105 434 PIRSF ILK 1 434 - -
Prci10g2105 434 Pfam Protein tyrosine and serine/threonine kinase 162 416 IPR001245 GO:0004672|GO:0006468
Prci10g2105 434 Gene3D Transferase(Phosphotransferase) domain 1 238 429 - -
Prci10g2105 434 PRINTS Tyrosine kinase catalytic domain signature 233 246 IPR001245 GO:0004672|GO:0006468
Prci10g2105 434 PRINTS Tyrosine kinase catalytic domain signature 271 289 IPR001245 GO:0004672|GO:0006468
Prci10g2105 434 PRINTS Tyrosine kinase catalytic domain signature 387 409 IPR001245 GO:0004672|GO:0006468
Prci10g2105 434 ProSiteProfiles Protein kinase domain profile. 158 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2105 434 Gene3D Phosphorylase Kinase; domain 1 142 237 - -
Prci10g2105 434 ProSiteProfiles Ankyrin repeat region circular profile. 66 98 - -
Prci10g2105 434 MobiDBLite consensus disorder prediction 1 27 - -
Prci10g2105 434 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 70 421 - -
Prci10g2105 434 Gene3D - 4 133 IPR036770 -
Prci10g2105 434 SMART ANK_2a 99 129 IPR002110 GO:0005515
Prci10g2105 434 SMART ANK_2a 66 95 IPR002110 GO:0005515
Prci10g2105 434 ProSitePatterns Protein kinases ATP-binding region signature. 164 185 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2105 Prci-Chr10 25941432 25949270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2105 1 434 MAP Kinase Kinase Kinase AT1G14000 81.050 0.0 735
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Prci10g2105 PK_Tyr_Ser-Thr 1.6e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2105 - - qsa:O6P43_025503 774.622