Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2103 ATGGCTTCTTCCATTTTCTCTGTACTTCAAGGCTCTGCTTTTCTTTCTTCTTCGGTATCCCACAAAATCAGCTCTTTCTCCTTTCCAATCCCACCCAAAGCCCCACTCCTTCACCTAAGAAAACCTCTCTCCGCCAAATCTCTTGCGTCTGTCGAAATGGACACTTCATTGTCGCCTGCGATTCAGACCTTTTGGCAGTGGTTATGGGAAGAAGGGGTCATCTCTTCAAAGACGCCGGTGGAGCCTGGGGTCGTGCCGGAAGGCCTCGGACTTATTGCCAGGAGAGACATTTCGCGAAACGAGGTCGTTTTGCAGGTTCCCAAGAGGCTCTGGATAAACCCCGATGCGGTGGCGGCTTCGGAGATTGGGAACGTGTGTAGCGGATTGAAGCCTTGGTTGTCGGTTGCTCTGTTCTTGATTAGAGAGAGGTCAAGGGATGAGTCTATTTGGAAGCATTACTTCAGAGTTCTCCCAGAGGTCACTGATTCGACAATATATTGGTCAGAGGAGGAGCTCTCTGAGCTTCAAGGTACTCAACTTCTGAATACAACACTAGCCGTGAAAGAATATGTGCAGAATGAGTTTCTAAAACTGGAACAAGAAATCGTACTCCCTAATAAGACGCTTTTCCCTTCTCCGATCACACTGGATGACTTCTTTTGGGCATTTGGAATTCTCAGATCGAGGGCTTTCTCTCGCCTTCGCAATGAAAATCTGGTGGTGATTCCACTTGCAGACTTGATAAACCATAGTGCGAGAGTAACTACTGAAGATCATGCATATGAAATTAAAGGAGCAGCAGGCCTTTTCTCATGGGATTACCTGTTTTCCCTAAGGAGCCCTCTTTCTGTCAAGGCCGGGGAGCAGATATTTATTCAATATGATTTGAAGAAAAGCAATGCAGAGTTGGCTTTAGACTACGGCTTCATTGAACCAAATGATAACAGGAATTCATATACCCTGACACTACAAATATCTGAGTCTGACCCCTTTTTTGATGATAAACTAGACATTGCAGAGTCCAATGGTTATGGTGAGACTGCATATTTCGACTTCTTCTTCAACCGACCACTTCCACCAGGCCTGCTTCCATATTTGCGTCTCGTGGCACTTGGTGGCACTGATGCTTTCTTGTTGGAATCTCTATTCAGAAACGCCATTTGGAGCCATCTTGATCTGCCCGTGAGCCGTGACAATGAGGAGCTAATATGTCGAGTTGTTCAAGATGCCTGTAAAACTGCCCTTACTGGATATCATACCACACTTGAAGAGGATGAGAAGTTAAAAGAAGAAAAGTTAGATTCAAGGTTGGCAATTGCAGTGGGAATAAGAGGAGGAGAAAAAAAGGTGCTGCAGCAGATTGAAGATATCTTCAAGGAGAAACAGGCAGAGTTGGATCTGTTAGAATATTATCATGAAAGGAGGCTCAAGGATCTTGGTCTTTGTGGAGAAAGTGGTGAGATACTTGGGGATCTCAGCAAGTTCATGTAA 1491 0.452 MASSIFSVLQGSAFLSSSVSHKISSFSFPIPPKAPLLHLRKPLSAKSLASVEMDTSLSPAIQTFWQWLWEEGVISSKTPVEPGVVPEGLGLIARRDISRNEVVLQVPKRLWINPDAVAASEIGNVCSGLKPWLSVALFLIRERSRDESIWKHYFRVLPEVTDSTIYWSEEELSELQGTQLLNTTLAVKEYVQNEFLKLEQEIVLPNKTLFPSPITLDDFFWAFGILRSRAFSRLRNENLVVIPLADLINHSARVTTEDHAYEIKGAAGLFSWDYLFSLRSPLSVKAGEQIFIQYDLKKSNAELALDYGFIEPNDNRNSYTLTLQISESDPFFDDKLDIAESNGYGETAYFDFFFNRPLPPGLLPYLRLVALGGTDAFLLESLFRNAIWSHLDLPVSRDNEELICRVVQDACKTALTGYHTTLEEDEKLKEEKLDSRLAIAVGIRGGEKKVLQQIEDIFKEKQAELDLLEYYHERRLKDLGLCGESGEILGDLSKFM 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2103 496 Gene3D - 311 475 IPR036464 -
Prci10g2103 496 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 60 438 - -
Prci10g2103 496 Pfam Rubisco LSMT substrate-binding 327 451 IPR015353 -
Prci10g2103 496 ProSiteProfiles SET domain profile. 71 295 IPR001214 GO:0005515
Prci10g2103 496 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 318 489 IPR036464 -
Prci10g2103 496 ProSiteProfiles Plant LSMT protein-lysine methyltransferase family profile. 3 494 IPR011192 GO:0009507|GO:0030785
Prci10g2103 496 CDD SET_RBCMT 80 310 IPR044431 GO:0016279|GO:0018022
Prci10g2103 496 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 311 475 - -
Prci10g2103 496 Gene3D set domain protein methyltransferase, domain 1 57 310 - -
Prci10g2103 496 Pfam SET domain 88 294 IPR001214 GO:0005515
Prci10g2103 496 SUPERFAMILY SET domain 57 317 IPR046341 -
Prci10g2103 496 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 57 309 - -
Prci10g2103 496 SMART set_7 78 301 IPR001214 GO:0005515
Prci10g2103 496 PIRSF RMT_SET 1 495 IPR011192 GO:0009507|GO:0030785
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2103 58 250 NAC Transcription Factor Family AT3G56570 28.713 4.60e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci10g2103 SET 7.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2103 K00592 - gmx:100818113 782.711