Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2090 ATGATCATGGAACAGACAAAGCCGCAGATAGCGATGGCCGAAGAAGAGTGTATGCAACAACTCAGATCTAGAGCAACAGAGCTTCTTCTAAGAGAAGAATGGAAGGAGTCGATCGAAGCCTACTCAAACTTCATATCTCTATGCCAAAACCAAATCTTTCAGACCCAAAACCTGTCCAACTCAGATCAGATTCAAAGGCTGCGAAAATCCCTCTGCTTAGCCCTTTCAAACAGAGCCGAAGCAAGATCAAGATTGAAAGAGTTTCATTCTGCTTTGGAAGATTGTGATTCAGCTTTGGAAATCGATGGCACCCATTTGAAGACTCTTGTCTGCAAAGGTAAGATACTGCTCAATCTCAATACGTATTCCGCGGCTTTAGATTTCTTCAGAGTCGCTCGTCTTGATCCCCAGGCTAATGGGAACTCTGAAAACCTAAATGGGTGTGTCGAGAAATGTAAAAGACTCGACTTCCTCTCCAGGACCGGAAGTCTGGACCTTTCCGATTGGGTTTCAAATGGGTTTCGAGGAAAGTCTCCAGAACTTGCAGAATACATTGGTTCTGTGGAGATCATGAAATCTGAGATCAGTGGACGTGGGTTGTTTGCAACTAAGAATATTGATGCAGGGGCTTTGGTTTTGGTCACAAAGGCAGTAGCGATGGAAAGGAGTGTATTGGGTGGGAAAGATTTGAGTGAGGAAGCTCAATTAGTAATGTGGAAGAATTTCATTGATCAGGTTTCAGACTTTGTTAGGAAATGTCACAGAACAAGCAATTTGATCAGCAAATTGTCAAGTGGGGAAGATGAAGATTCACTTGAGGTTCCTGATATTACTCTCTTTAAACCAGGAACAGGAGCGAACAAGAACAAGAACAAGCAACCCAGTGAGAATGAGAAGATTGATATGGGCAAGTTACTAGCCATTTTGGATGTGAATTCTCTAACTGAAGATGCAGTTTCAGCCAATGTATTGGGGAAGAAGAACAATGATTACTATGGTGTTGGGCTATGGTTACTACCTTCCTTCATCAACCATTCATGCTGCCCCAATTCAAGGAGGTTGCATGTAGGAGATTATCTGATAGTTCATGCTTCTAAAGATATCAAAGCAGGTGAGGAGATTACTTTCGCCTATTTGGACCCACTTTCTTCATTGCACAAGCGCAAAGAGATGTCAGTGACATGGGGAATCCATTGTAGATGCAGGAGATGCAAGTTTGAGTCAGAAATCGTGTGCAAACAAGAGATCAGAGAGATTGAGATTGGTCTTGAAAGAGGGATGGATGTGGGAAGTGCGGTGTACAAATTAGAAGAAGAAATGAAGAGATGGAAAGTGAGAGGGAAAGAGAAGGCATATCTGAGGGCATCATTTTGGTCTGCATATTCTGAGGTTTACAGGGCTGATAGGTTCATGAAGAGGTGGGGAAGGAGAATTCCAGCCATGGAAGCTGTGGTTCATAGCATCATAGATGTTATAGGAGGAGATGATAGACTGCTTAAGATTCAGATGGAAGAGTTGAAGAAAAATGGAGGTTGTGGACTTGTGGAGATGGAGAAAGCTTTGAAGCTAGCAAGAGAAGTGTATGGGAAGGTGGTGAAAAAGCAGGCCATGAGGACTCTCCTTGAGCTTTGTGTTGGAACAAATGAATGA 1650 0.4291 MIMEQTKPQIAMAEEECMQQLRSRATELLLREEWKESIEAYSNFISLCQNQIFQTQNLSNSDQIQRLRKSLCLALSNRAEARSRLKEFHSALEDCDSALEIDGTHLKTLVCKGKILLNLNTYSAALDFFRVARLDPQANGNSENLNGCVEKCKRLDFLSRTGSLDLSDWVSNGFRGKSPELAEYIGSVEIMKSEISGRGLFATKNIDAGALVLVTKAVAMERSVLGGKDLSEEAQLVMWKNFIDQVSDFVRKCHRTSNLISKLSSGEDEDSLEVPDITLFKPGTGANKNKNKQPSENEKIDMGKLLAILDVNSLTEDAVSANVLGKKNNDYYGVGLWLLPSFINHSCCPNSRRLHVGDYLIVHASKDIKAGEEITFAYLDPLSSLHKRKEMSVTWGIHCRCRRCKFESEIVCKQEIREIEIGLERGMDVGSAVYKLEEEMKRWKVRGKEKAYLRASFWSAYSEVYRADRFMKRWGRRIPAMEAVVHSIIDVIGGDDRLLKIQMEELKKNGGCGLVEMEKALKLAREVYGKVVKKQAMRTLLELCVGTNE 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2090 549 Gene3D SET domain 286 410 IPR046341 -
Prci10g2090 549 SMART tpr_5 18 51 IPR019734 GO:0005515
Prci10g2090 549 SMART tpr_5 72 105 IPR019734 GO:0005515
Prci10g2090 549 CDD SET_SMYD 306 404 - -
Prci10g2090 549 ProSiteProfiles SET domain profile. 186 379 IPR001214 GO:0005515
Prci10g2090 549 Gene3D Tetratricopeptide repeat domain 14 156 IPR011990 GO:0005515
Prci10g2090 549 SUPERFAMILY TPR-like 19 132 IPR011990 GO:0005515
Prci10g2090 549 SMART set_7 186 385 IPR001214 GO:0005515
Prci10g2090 549 PANTHER TPR DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G12710) 14 542 - -
Prci10g2090 549 SUPERFAMILY SET domain 187 405 IPR046341 -
Prci10g2090 549 Pfam SET domain 197 378 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci10g2090 SET 3.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2090 - - qsa:O6P43_025489 777.319