Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2087 ATGATGAACCAATCAAACGTCGGCAAGTCCACAAAACGACAAAATCCCCCAACGATAAAAGCACCTTCCACTTCCTTGCAAACATTTCAAACACCTTCGTTTCTCTCAAGTCTTGTTTACAGATTCCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTCTGCTTTCTTACTCTGTAACTCGCACACCACCTTTTGATACTTTGCCTCTGAGAAACAAACAAGTTTCAATGGAGCTCGGAACAACAAGAGGCTCTGGTCTTCCTCCTGGCTTCAGATTCCATCCCACCGATGAGGAACTAATCGTCCATTACCTTTGTAACCAAGCCACATCCAAGCCTTGCCCTGCATCTATCATCCCTGAAGTTGATATCTACAAGTTTGATCCCTGGCAATTACCTGAGAAGGCAGTGTTTGGGGAGAATGAGTGGTATTTCTTTAGCCCGAGAGACAGGAAGTACCCAAATGGGGTGAGGCCAAACAGGGCCACTGTGTCGGGGTACTGGAAGGCCACTGGCACAGATAAAGCAATCTACAGTGGGGCCAAACACATTGGGGTGAAGAAAGCTCTGGTCGTTTACAAAGGAAGGCCACCAAAAGGTGTCAAGACCGATTGGATCATGCATGAGTATCGCCTCATTGGTCCTCCAAGACGAGCCAACAAGCATATTGGATCCATGAGATTAGATGACTGGGTGCTGTGTAGGATTTACAAGAAGAAGAACGTGTCAAAATCATCAGTCGAACTCAAGGAGGAATACCCAAGTCCGCAAATGAACATAACAGAAGAAGATAACATTGGGAATGAGCAAAACATGGTGAAATTTCCGAGGACTTGTTCTCTGACTCATCTTCTTGAAATGGATACTTACTTGGCTCCTATCTCACACGTTCTGTCTGATCCTTCCTATAACTCCACCTTGGATTACCAGATGAATAATGCTGGGAACATAATGGACCCATTTGTAAAACATCAGGTCTTTGAGGTCTCAGACCAGTACTATTCAGCACCATCATCAACCAGCCAATATTTTGTGAACCAGGTGTGA 1044 0.4464 MMNQSNVGKSTKRQNPPTIKAPSTSLQTFQTPSFLSSLVYRFLLLLLLLLLSLLSYSVTRTPPFDTLPLRNKQVSMELGTTRGSGLPPGFRFHPTDEELIVHYLCNQATSKPCPASIIPEVDIYKFDPWQLPEKAVFGENEWYFFSPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSGAKHIGVKKALVVYKGRPPKGVKTDWIMHEYRLIGPPRRANKHIGSMRLDDWVLCRIYKKKNVSKSSVELKEEYPSPQMNITEEDNIGNEQNMVKFPRTCSLTHLLEMDTYLAPISHVLSDPSYNSTLDYQMNNAGNIMDPFVKHQVFEVSDQYYSAPSSTSQYFVNQV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2087 347 Pfam No apical meristem (NAM) protein 87 211 IPR003441 GO:0003677|GO:0006355
Prci10g2087 347 PANTHER NAC TRANSCRIPTION FACTOR 56 86 261 - -
Prci10g2087 347 ProSiteProfiles NAC domain profile. 86 238 IPR003441 GO:0003677|GO:0006355
Prci10g2087 347 FunFam NAC transcription factor 95 242 - -
Prci10g2087 347 SUPERFAMILY NAC domain 81 238 IPR036093 GO:0003677|GO:0006355
Prci10g2087 347 Gene3D NAC domain 95 242 IPR036093 GO:0003677|GO:0006355
Prci10g2087 347 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2087 Prci-Chr10 25553498 25555158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2087 78 296 NAC Transcription Factor Family AT1G69490 65.517 1.99e-107 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci10g2087 NAM 7.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2087 - - pcin:129322687 701.434