Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2075 ATGGCTTCCGAACCCGAAGTGTCCGAGATTTTTGCGGTGTTCGAAAGGATGGTGAGAAACAGAGACCTTACGCTGTTTCTCCCATTCATCTTTGGCTTATCTAATGCTGCTTTCAGAAGTGAAGGCGAAGACTCAGGTCAGGAAAATGAGAGTGGAGAAAGTCCCCAACGCGAAAGAATCATCTTGATCAACCCCTTCACGCAGGGTGTGGTGGTGATCGATGTTGCTTCTAGCCTCGAGGGCCTGTTTCGTGATTTGGGTAGTGGCAAGGGTGGGCAGCCTCCAGCTTCTAAAGAAGCCATAGATGCTTTGCCCAGTGTTAAAATTGAGGAAGGTGAAGAGGGAGAGTGTGTGATTTGCTTGGAGGAGTGGGAAGCTGGTGGGATGGTCAAAGAGATGCCTTGTAAGCATAAATTTCATCCCAATTGTGTAGACAAATGGTTGGGGATACATGGGTCTTGCCCAGTTTGCAGGTATGACATGCCTATTGATGAAGTTGGGAAGAAGAGAGACGAAGAAGACGGGGAAGAGAGGAGGAGAAGGATTGGGAGAGAAGCTTGGGTCAGTTTCTCTTTCAATGGTGAAGGAGGAAGTAGTGAGAACTCAAATCAGGCCCCTTCAGGTGATTCTCGTGATTCTTCATCAAGTCCGAGAGATGATGATGAGGCTGCTGATAGTTAG 681 0.4802 MASEPEVSEIFAVFERMVRNRDLTLFLPFIFGLSNAAFRSEGEDSGQENESGESPQRERIILINPFTQGVVVIDVASSLEGLFRDLGSGKGGQPPASKEAIDALPSVKIEEGEEGECVICLEEWEAGGMVKEMPCKHKFHPNCVDKWLGIHGSCPVCRYDMPIDEVGKKRDEEDGEERRRRIGREAWVSFSFNGEGGSSENSNQAPSGDSRDSSSSPRDDDEAADS 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2075 226 MobiDBLite consensus disorder prediction 192 212 - -
Prci10g2075 226 Pfam Ring finger domain 116 158 IPR001841 -
Prci10g2075 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 164 IPR013083 -
Prci10g2075 226 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 52 162 - -
Prci10g2075 226 MobiDBLite consensus disorder prediction 168 226 - -
Prci10g2075 226 MobiDBLite consensus disorder prediction 168 185 - -
Prci10g2075 226 FunFam E3 ubiquitin-protein ligase RNF181 85 164 - -
Prci10g2075 226 SMART ring_2 117 157 IPR001841 -
Prci10g2075 226 SUPERFAMILY RING/U-box 107 163 - -
Prci10g2075 226 ProSiteProfiles Zinc finger RING-type profile. 117 158 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2075 Prci-Chr10 25131929 25132941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2075 1 193 C3H Transcription Factor Family AT1G26800 51.256 2.46e-62 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2075 - - pcin:129321278 368.237