Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2030 ATGCTAATAACTAGTGGAATTTCATATATTCTAGTTCAAAAATCAAAGAGAAGAAAAGGTCACGATGGAGAGGCAATAACTCTCAATATTTTCTCCATTTTGGGTTTTGATGGGGAAATTTTATGTGAAAAGGTTGTGGAGGCTACGGAGGATTTTGATGAGAAATATCTCATTGGAGTTGGAGCACAAGGAGGTGTTTATAAAGTTGAGATACTTGATAGTCAAATTTATGATGTGAAGAAACTCCATCCAAATTATTGTAATGCAGATTTTTCTAATCCTCAAGCATTTTCAAGGGAAATTCAAGCATTAACAGAGATCAAACATCATAATGTCATGAAGTTGCATGGGTTTTATTTAAATTCATGCCTATCATTCCTTGTTTATGAGTTCCTAGAAGGTGGTAGCTTGGATAAGATTATAAAAAATGACATGCAAGCATCTAAACTTGAGTGGGATAAGAGGGTGATTGTTGTTAGAGGTGTGGTTGATGCATTATTCCACATGCACCATGGTCTTTCATGCCCTATAGTTCATCGTGACACATCAAGCAAGAACATCCTATTAGATCAAAAATATCAAGAAGCTCATATCAATGACTTTGGAATAGCAAAGTTTTTAAAGCTAGACTTGAACAACATGACCTCATTTGCTGGCACCTATGGCTATGCAGCTCCAGTATCACTGCTTTGTTCTAGCAAGGCTGTTATTGCTCCTTCTTCTAATTCTTTGAAGCTGTTCACTAATACATCATTGGCAAGATATAACCCATTGGAACGCCGAAGAAAATGCTCATACAAATTTGTCGTGTTTGATGTAGAGATTGCTTTTACAATGCAAGCAAATGAGAAATGTGATGTTCATAATTTTGGGGTCTTCCCACATTGGAAATCTTAA 897 0.359 MLITSGISYILVQKSKRRKGHDGEAITLNIFSILGFDGEILCEKVVEATEDFDEKYLIGVGAQGGVYKVEILDSQIYDVKKLHPNYCNADFSNPQAFSREIQALTEIKHHNVMKLHGFYLNSCLSFLVYEFLEGGSLDKIIKNDMQASKLEWDKRVIVVRGVVDALFHMHHGLSCPIVHRDTSSKNILLDQKYQEAHINDFGIAKFLKLDLNNMTSFAGTYGYAAPVSLLCSSKAVIAPSSNSLKLFTNTSLARYNPLERRRKCSYKFVVFDVEIAFTMQANEKCDVHNFGVFPHWKS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2030 298 Gene3D Phosphorylase Kinase; domain 1 14 131 - -
Prci10g2030 298 Pfam Protein kinase domain 54 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2030 298 PANTHER LEUCINE RICH REPEAT KINASE 2 13 292 - -
Prci10g2030 298 ProSiteProfiles Protein kinase domain profile. 52 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2030 298 FunFam Leucine-rich repeat receptor protein kinase MSP1 15 131 - -
Prci10g2030 298 SUPERFAMILY Protein kinase-like (PK-like) 42 230 IPR011009 -
Prci10g2030 298 Gene3D Transferase(Phosphotransferase) domain 1 132 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2030 Prci-Chr10 22268477 22272615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2030 3 229 Receptor kinase-like Gene Family AT4G08850 47.391 5.35e-57 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci10g2030 Pkinase 3.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2030 - - pcin:129317259 362.459