Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci10g2030 | ATGCTAATAACTAGTGGAATTTCATATATTCTAGTTCAAAAATCAAAGAGAAGAAAAGGTCACGATGGAGAGGCAATAACTCTCAATATTTTCTCCATTTTGGGTTTTGATGGGGAAATTTTATGTGAAAAGGTTGTGGAGGCTACGGAGGATTTTGATGAGAAATATCTCATTGGAGTTGGAGCACAAGGAGGTGTTTATAAAGTTGAGATACTTGATAGTCAAATTTATGATGTGAAGAAACTCCATCCAAATTATTGTAATGCAGATTTTTCTAATCCTCAAGCATTTTCAAGGGAAATTCAAGCATTAACAGAGATCAAACATCATAATGTCATGAAGTTGCATGGGTTTTATTTAAATTCATGCCTATCATTCCTTGTTTATGAGTTCCTAGAAGGTGGTAGCTTGGATAAGATTATAAAAAATGACATGCAAGCATCTAAACTTGAGTGGGATAAGAGGGTGATTGTTGTTAGAGGTGTGGTTGATGCATTATTCCACATGCACCATGGTCTTTCATGCCCTATAGTTCATCGTGACACATCAAGCAAGAACATCCTATTAGATCAAAAATATCAAGAAGCTCATATCAATGACTTTGGAATAGCAAAGTTTTTAAAGCTAGACTTGAACAACATGACCTCATTTGCTGGCACCTATGGCTATGCAGCTCCAGTATCACTGCTTTGTTCTAGCAAGGCTGTTATTGCTCCTTCTTCTAATTCTTTGAAGCTGTTCACTAATACATCATTGGCAAGATATAACCCATTGGAACGCCGAAGAAAATGCTCATACAAATTTGTCGTGTTTGATGTAGAGATTGCTTTTACAATGCAAGCAAATGAGAAATGTGATGTTCATAATTTTGGGGTCTTCCCACATTGGAAATCTTAA | 897 | 0.359 | MLITSGISYILVQKSKRRKGHDGEAITLNIFSILGFDGEILCEKVVEATEDFDEKYLIGVGAQGGVYKVEILDSQIYDVKKLHPNYCNADFSNPQAFSREIQALTEIKHHNVMKLHGFYLNSCLSFLVYEFLEGGSLDKIIKNDMQASKLEWDKRVIVVRGVVDALFHMHHGLSCPIVHRDTSSKNILLDQKYQEAHINDFGIAKFLKLDLNNMTSFAGTYGYAAPVSLLCSSKAVIAPSSNSLKLFTNTSLARYNPLERRRKCSYKFVVFDVEIAFTMQANEKCDVHNFGVFPHWKS | 298 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci10g2030 | 298 | Gene3D | Phosphorylase Kinase; domain 1 | 14 | 131 | - | - | |
Prci10g2030 | 298 | Pfam | Protein kinase domain | 54 | 229 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci10g2030 | 298 | PANTHER | LEUCINE RICH REPEAT KINASE 2 | 13 | 292 | - | - | |
Prci10g2030 | 298 | ProSiteProfiles | Protein kinase domain profile. | 52 | 298 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci10g2030 | 298 | FunFam | Leucine-rich repeat receptor protein kinase MSP1 | 15 | 131 | - | - | |
Prci10g2030 | 298 | SUPERFAMILY | Protein kinase-like (PK-like) | 42 | 230 | IPR011009 | - | |
Prci10g2030 | 298 | Gene3D | Transferase(Phosphotransferase) domain 1 | 132 | 293 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci10g2030 | Prci-Chr10 | 22268477 | 22272615 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci10g2030 | 3 | 229 | Receptor kinase-like Gene Family | AT4G08850 | 47.391 | 5.35e-57 | 195 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Prci10g2030 | Pkinase | 3.5e-27 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci10g2030 | - | - | pcin:129317259 | 362.459 |