Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2023 ATGGCGAGATGGCCGACGACGGCATTGTTTCCAAAAATCGATCTTAGAGAATTGCGGACCAAGGGTTGCATTTATTTGGTGTATATTTCTGCAATCTCTGGGGCTTTATCTCAAGAACCCGAACTTGGATCTACCCGTGTTGTCTTTCAGACGAATTACGGGGATATTGAATTTGGTTTCTTTCCCACAGTTGCACCCAAAACTGTTGATCACATTTTTAAACTTGTGCGACTTGGATGCTATAACACAAATCACTTTTTCCGGGTAGATAAGGGCTTTGTGGCCCAAGTAGCGGATGTTATGGGTGGAAGATCCGCTCCCATGAATGAAGAACAAAAAAGAGAAGCTGAAAAGACTGTTGTTGGTGAATTTAGCCAAGTCAAACATGTTCGAGGTATTCTTTCTATGGGAAGATACAGTGATCCAGACAGTGGTGGATCTTCATTTTCAATGCTTCTGGGAGATGCTCCTCATCTTGACGGCCAGTATGCAGTATTTGGAAGAGTCACTAGAGGCGATGATACATTGAGAAAGCTTGAGGAACTACCTACTCGTAAAGAAGGGATATTTGTTATGACACCGAGAGTGAAGATTGCGAAGGAGACAGATCGATTTTGA 618 0.4288 MARWPTTALFPKIDLRELRTKGCIYLVYISAISGALSQEPELGSTRVVFQTNYGDIEFGFFPTVAPKTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVMGGRSAPMNEEQKREAEKTVVGEFSQVKHVRGILSMGRYSDPDSGGSSFSMLLGDAPHLDGQYAVFGRVTRGDDTLRKLEELPTRKEGIFVMTPRVKIAKETDRF 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2023 205 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 132 147 IPR002130 GO:0000413|GO:0003755
Prci10g2023 205 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 60 75 IPR002130 GO:0000413|GO:0003755
Prci10g2023 205 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 86 98 IPR002130 GO:0000413|GO:0003755
Prci10g2023 205 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 161 176 IPR002130 GO:0000413|GO:0003755
Prci10g2023 205 CDD cyclophilin 48 200 - -
Prci10g2023 205 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 48 198 IPR002130 GO:0000413|GO:0003755
Prci10g2023 205 SUPERFAMILY Cyclophilin-like 46 192 IPR029000 -
Prci10g2023 205 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 47 199 IPR002130 GO:0000413|GO:0003755
Prci10g2023 205 Gene3D - 34 203 IPR029000 -
Prci10g2023 205 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 22 198 IPR044233 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2023 Prci-Chr10 21713072 21728368 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2023 47 183 U-box Gene Family AT5G67530 31.724 1.77e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2023 - - pcin:129321584 390.963