Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2006 ATGGAAAATTCAGATATGTATAGGCACATACAGGAGAAACTGCACATTCCAGAAGATAAAGCATGCATCATTTTGGAAGGGGAAGGCAGAGAAGTTACTACAATTACGTACAGTGATCACCAACAAACAGATACAACTGCAACCTTTTCTTCCTTTCCCAACAATATTGTTGCATCTGGAATCAGCTTCCAGAACTCGCTTTATCTCTCAGATCAATCAGAATTGGAGCGAAACATAAATGTAAAACCAGCATTGGCTGCAATAATATATGGCGACAAATCAGCATTTTTGGATTGTGGCTTCTTGGGTTTTCAAGATGCACTTTGA 327 0.3884 MENSDMYRHIQEKLHIPEDKACIILEGEGREVTTITYSDHQQTDTTATFSSFPNNIVASGISFQNSLYLSDQSELERNINVKPALAAIIYGDKSAFLDCGFLGFQDAL 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2006 108 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 11 108 - -
Prci10g2006 108 Pfam Pectinesterase 11 108 IPR000070 GO:0030599|GO:0042545
Prci10g2006 108 SUPERFAMILY Pectin lyase-like 11 108 IPR011050 -
Prci10g2006 108 Gene3D - 4 108 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2006 Prci-Chr10 20349394 20351226 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2006 1 108 Carbohydrate Esterase AT2G19150 42.105 3.18e-24 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2006 - - pcin:129322487 219.164