Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1974 ATGGCTTTCTTCCCTGCAAATTTCATGCTTCAAACCTCTCACCCAGAGGATCATCACCGCCACCACCACCAACCTCCTCCTTCTCTCAACTCTCTCCTTCCTTCATGTGCTCCACAGGATTATCATCATCATGGGGGGCCTTCATTTCTTGGTAAGAGATGCATGTCATTTTCAGGAATCGAGCTGATGGGTGAAGAAGCTAATAATAATAATGGTGACGAAGACTTGTCTGATGACGGGTCTCAGGCGGGGGAGAAGAAGAGGAGGCTAAACATGGAACAGGTTAAGACACTTGAGAAAAGCTTCGAGCTTGGAAACAAGCTTGAACCAGAGAGGAAAATGCAGCTTGCAAGAGCTCTAGGATTGCAACCCAGACAGATTGCGATATGGTTCCAGAACAGAAGAGCCAGGTGGAAGACAAAGCAGCTTGAGAAAGACTATGATGTTCTTAAAAGACAATATGATGCTCTTAAAGCAGACAATGATTCTCTTCAAGCTCAAAACCAAAAACTCCAAGCTGAGATATTTGCATTGAAGAACAGAGAACCAACTGAATCTATCAACCTGAACAAGGAAACAGAGGGATCTTGCAGCAACAGAAGTGAGAACAGCTCAGAGATTAAGTTTGATATAACAAGAACAACTGCTATTGATAGTCCTGATCTTTCAACACATAATCAAACTAGCATAACCTTATTTCCATCTTCTTCTGCTTCTGTTAGGCCACCTTCTTCAGGAGGAGTGGCTCACCAGCAGCAGCTCTTTCAAGCTTGTTCAAGACCAGAGCTTCAGTGTCAGAAGGTAGATCAGATGGTGAAAGAAGAGAATAATAATTTGAGCAATATGTTCTGTGGGATCGATGATCAGTCTGGGTTCTGGCCATGGTTAGAGCTGCAACATTTCAATTGA 909 0.4334 MAFFPANFMLQTSHPEDHHRHHHQPPPSLNSLLPSCAPQDYHHHGGPSFLGKRCMSFSGIELMGEEANNNNGDEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQYDALKADNDSLQAQNQKLQAEIFALKNREPTESINLNKETEGSCSNRSENSSEIKFDITRTTAIDSPDLSTHNQTSITLFPSSSASVRPPSSGGVAHQQQLFQACSRPELQCQKVDQMVKEENNNLSNMFCGIDDQSGFWPWLELQHFN 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1974 302 MobiDBLite consensus disorder prediction 14 36 - -
Prci10g1974 302 MobiDBLite consensus disorder prediction 186 205 - -
Prci10g1974 302 Gene3D - 78 147 - -
Prci10g1974 302 FunFam Homeobox-leucine zipper protein ATHB-13 78 145 - -
Prci10g1974 302 Pfam Homeodomain 86 139 IPR001356 GO:0003677
Prci10g1974 302 MobiDBLite consensus disorder prediction 189 205 - -
Prci10g1974 302 SUPERFAMILY Homeodomain-like 76 143 IPR009057 -
Prci10g1974 302 Coils Coil 133 181 - -
Prci10g1974 302 Pfam Homeobox associated leucine zipper 141 181 IPR003106 GO:0006355|GO:0043565
Prci10g1974 302 ProSitePatterns 'Homeobox' domain signature. 116 139 IPR017970 GO:0000981|GO:0006355
Prci10g1974 302 CDD homeodomain 86 142 IPR001356 GO:0003677
Prci10g1974 302 PRINTS Lambda-repressor HTH signature 121 137 IPR000047 GO:0003677
Prci10g1974 302 PRINTS Lambda-repressor HTH signature 112 121 IPR000047 GO:0003677
Prci10g1974 302 SMART HOX_1 84 145 IPR001356 GO:0003677
Prci10g1974 302 ProSiteProfiles 'Homeobox' domain profile. 81 141 IPR001356 GO:0003677
Prci10g1974 302 MobiDBLite consensus disorder prediction 65 89 - -
Prci10g1974 302 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 71 225 IPR045224 GO:0003700
Prci10g1974 302 MobiDBLite consensus disorder prediction 218 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1974 Prci-Chr10 19242112 19243621 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1974 1 302 Homeobox Transcription Factor Family AT1G69780 62.783 5.16e-115 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci10g1974 Homeodomain 1.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1974 K09338 - gmx:100801479 423.705