Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1964 ATGCGCGAGGAAGCTCGAGAAAGAAGAAATGTCAAGTTCATCACCATCCTTCTTTTCCTCTACGTCACCATCGCTACTGTTATCAGCCACAAAAAAAAGCAGCTCGGCTTCTGTAACAGTATGGGCTTCCTAGGCATCACTTGGGCCTTCGGTGGCATGATCTTCATCCTCATTTATTGCACCGCCAATATCACTGGTGGCCACATCAATCCTGCAGTTACATTCGGATTGTTCTTGGCCAGGAAGGTAACATTCATCCGAGCTTTAGTGTATATGGTAGCTTGGTGCTTAGGAGCTATTTGTGGTACTGGACTGGTCAAGGCTTGGTAA 330 0.4667 MREEARERRNVKFITILLFLYVTIATVISHKKKQLGFCNSMGFLGITWAFGGMIFILIYCTANITGGHINPAVTFGLFLARKVTFIRALVYMVAWCLGAICGTGLVKAW 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1964 109 ProSitePatterns MIP family signature. 68 76 IPR022357 -
Prci10g1964 109 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 12 108 IPR034294 -
Prci10g1964 109 Pfam Major intrinsic protein 13 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci10g1964 109 PRINTS Major intrinsic protein family signature 50 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci10g1964 109 PRINTS Major intrinsic protein family signature 7 26 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci10g1964 109 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci10g1964 109 Gene3D Glycerol uptake facilitator protein. 11 109 IPR023271 -
Prci10g1964 109 SUPERFAMILY Aquaporin-like 17 108 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1964 Prci-Chr10 18907709 18908038 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1964 12 109 Major Intrinsic Protein MIP AT4G35100 73.469 8.76e-47 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1964 K09872 - pcin:129322479 225.713