Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1956 ATGGATTTGGACCAGTGGATCGCGAAGGTGAAGGAAGGGCAGCATCTTCTGGAAGACGAGCTTCAGCTTCTTTGCGAATATGTAAAAGAGATCCTCATTGAGGAGTCCAATGTGCAGCCAGTGAATAGCCCGGTAACTGTTTGTGGTGATATTCATGGCCAATTTCATGATCTGATGAAACTTTTCCAGACAGGGGGTCATGTACCTGAGACAAATTATATCTTTATGGTAGGCGCTACACTTCTGTCAAGAAACTTTATTGATGAATGTAAGTTTTTCCTTTATCTGATCCTATATGTGTTGCAGGGAGACTTTGTTGATAGAGGGTACAATAGTCTAGAAGTTTTCACCATCCTATTACTTCTTAAAGCTAGATACCCAGCTAATATTACCCTTTTACGAGGAAACCATGAAAGTAGGCAACTAACCCAGGTCTATGGATTTTATGATGAATGCCAGAGGAAGTATGGAAATGCTAATGCATGGCGGTATTGTACAGATGTTTTTGACTACCTAACACTTTCAGCAATAATAGATGGAACTGTGCTCTGTGTTCATGGCGGTCTTTCTCCTGACATTCGAACAATTGATCAGATAAGGGTTATTGATCGAAATTGTGAAATTCCACATGAGGGACCCTTTTGTGATCTGATGTGGAGTGATCCTGAAGATATTGAGACATGGGCTGTGAGTCCCCGTGGGGCAGGCTGGCTTTTTGGATCCAGGGTCACTTCTGAGTTCAATCACATAAATAATCTTGATCTTGTTTGTCGTGCCCATCAACTTGTGCAAGAAGGCCTCAAGTATATGTTTCAAGATAAAGGCCTTGTAACTGTATGGTCTGCACCTAATTATTGTTACCGATGTGGAAACGTTGCTTCTATTTTGAGCTTCAATGAAAATATGGAGAGAGAGGTTAAATTTTTCACTGAAACGGAGGAGAACAACCAGATGAGGGGGCCTAGGACAGGCGTTCCATATTTCTTGTAA 990 0.4152 MDLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMVGATLLSRNFIDECKFFLYLILYVLQGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIDRNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1956 329 ProSitePatterns Serine/threonine specific protein phosphatases signature. 133 138 IPR006186 GO:0016787
Prci10g1956 329 PRINTS Serine/threonine phosphatase family signature 275 291 IPR006186 GO:0016787
Prci10g1956 329 PRINTS Serine/threonine phosphatase family signature 252 272 IPR006186 GO:0016787
Prci10g1956 329 PRINTS Serine/threonine phosphatase family signature 99 126 IPR006186 GO:0016787
Prci10g1956 329 PRINTS Serine/threonine phosphatase family signature 132 156 IPR006186 GO:0016787
Prci10g1956 329 PRINTS Serine/threonine phosphatase family signature 196 223 IPR006186 GO:0016787
Prci10g1956 329 PRINTS Serine/threonine phosphatase family signature 44 71 IPR006186 GO:0016787
Prci10g1956 329 PRINTS Serine/threonine phosphatase family signature 167 193 IPR006186 GO:0016787
Prci10g1956 329 Pfam Calcineurin-like phosphoesterase 44 261 IPR004843 GO:0016787
Prci10g1956 329 SUPERFAMILY Metallo-dependent phosphatases 2 312 IPR029052 -
Prci10g1956 329 Gene3D - 1 329 IPR029052 -
Prci10g1956 329 SMART pp2a_7 16 313 IPR006186 GO:0016787
Prci10g1956 329 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 2 329 IPR047129 GO:0004722
Prci10g1956 329 CDD MPP_PP2A_PP4_PP6 2 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1956 Prci-Chr10 18608801 18621172 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1956 43 247 Calmodulin-binding Proteins AT5G63870 34.440 4.95e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1956 K15498 - csv:101213373 624.78