Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1952 ATGGTGCGTTGGTCATTCACCACGGCACAGACATTCAAATTATTCTTCTCTTTATTTTTGCTTTGGAAGAAACTGATAATTTTGCTCGTCCTAATGGCCAAGAGACACCTTTTCTTCTTCTTCTTCCGGTTCTTTACAATTCTGTTCATCATTTTCCCGCCATGTATGTCCGCAAGTATAGAAACAGAGGCTCTCCTTCAGTTCAAGAAGCATTTGAAGGACCCTTTGAATTCTTTGGGTTCGTGGATAGATTCTGAGTCTCCCTGTGAATTCCACGGCATTACCTGTGATAAATTTTCCGGAAAAGTCATAGAAATTTCACTGGAAAATAAGTCTCTTTCCGGGGAGATTTTCCCGTCAATTTTTGATCTCCAGAGCCTTCGAGTTCTGTTACTTGCATCAAATTTTATTTCTGGGAAGCTTCCATTTGAAATAAGCAATTGCAGCAACCTTACAGTCTTGAACCTAACAGAGAATGACATGGTTGGGGCTATTCCAGACTTGTCTGGGATGAGAAATCTCAAAGTTCTTGACCTCTCAGCAAACTACTTCTCCGGGAGCTTCCCAAACTGGGTTGGAAATTTGACTGGTCTGGTTTCATTGGGGCTCGGGGAAAATGAATATGTTGAGAGTGAAATTCCTGAGACTCTTGGCAATCTGAAGAAATTGACATGGCTCTATCTTGGTGGTTCTCATTTGCGAGGAGAGATTCCAGAATCAATTTATGAAATGAAGGCTCTGGAGACACTGGATATTTCAAGAAACATGATCTCTGGGAAACTCTCCAAGTCAATTTTGAAGCTGAAAAATCTTTATAAGATTGAGCTTTTCTCAAACAATTTAACTGGGCAAATCCCAGCTGAGCTGGCAAACTTGACTAAACTTGAGGAGATTGACATTTCCAAGAACCACATGCATGGTAAATTGCCGGAGGTGATTGGTACTATGAAGAATTTGGTCGTTTTTCAACTCTATGAAAACAACTTTTCTGGAGAACTTCCTGCTGGGTTTGGAGATATGCAACATCTTGTTGGATTCTCAATTTATCGAAACAGCTTCTCTGGGAAAATACCAGAAAATTTTGGCCGATTTTCACCACTGGATAGCATTGATATATCAGAGAATCAATTTTCAGGTAAGCTTCCTTCACAACTTGGCAAGCTGATGAATTTGGAGAAGCTATACTTGAGCAACAACAATTTCTATGGTGAAATACCAGCTGAAATTGGAGCTCTGAAGCAATTATCCTCTTTTCATCTAGAAGAGAATTCATTAACTGGATCAATACCTGCAGAACTTGGTAATTGTGCAAGGCTAGTAGACTTGAATTTTGCTCAGAATTTTCTTACTGGCACTATCCCGCAGTCAGTTTCACTTATGAGCTCATTGAACTCTCTTAATCTATCTGGCAACAAACTTACAGGCTCGATCCCAGAAAGCTTAGTGTCAATGAAATTGAGCTCAATTGATTTTTCCAAAAACCAGTTGTCTGGGAGAATTCCGAACAATCTTCTAATTATTGGTGGTGATGAAGCTTTTGTTGGAAACCCAGGACTTTGTGTTGATCAAAATTCAAGAACTCTTATGAATTCTGAATTCAACATTTGTACAAGCATACATGGTCCGAAAAAGGTCTTCGCTGATAAGATAATAATTCTTTGTACCATTGCTTCTGTCTTGGTTGTACTTTTGGTTGTGTTGCTTGTGAGTTACGGAGGCTTCAAGCATGAAAATGCAGATCTGGAGAAAAACATAAAAGGTCATAAGGAAACAGATTCAAAATGGAAAATGGCTGCTTTCCACCAAGTTGATCTTGATGTGAATGAAATATGTAATCTGGATGAAGATAATTTGATTGGAACTGGTGGCACTGGAAAGGTTTATCGAGTTAACTTGAAGAAAACTCGTTCAACAGTGGCTGTAAAACAACTATGGAAAGGAAATAGTGTAAAAATTTTGGCGGCAGAGATGGAGACTTTGGGGAAAATAAGGCATAGAAATATACTTAAGCTTTATGCTTCTTTGTTTAAAGGAGGATCAAACTATTTAGTGTTAGAGTACATGCCAAATGGTAATCTTTTTCAAGCTCTTCACAGACAGATAAAGGGTGGGAAACCAGAATTGGATTGGTACCAGAGATATAAAATTGCACTGGGCACCGCAAAAGGAATTGCCTATTTACATCATGATTGTTCTCCACCTATCATCCACAGAGACATAAAATCCAGTAACATTTTGCTTGATGAGGATTATGAGGCAAAAATTGCTGATTTTGGGGTCGCAAAATTTGCAGAAAAAACTGATCAGCAGTTGGGTTTTAGCTGTCTTGCTGGCACTCATGGTTATATTGCTCCTGAGCTGGCTTATACATGTGAAGTCACTGAAAAGAGTGATGTGTATAGTTTTGGAGTGGTGTTGCTGGAATTACTTACAGGAAGGGAAGCCATTGAAGAGGATTACGGAGAAGGGAAAGATATTGTATATTGGGTTATGACGAATCTGGATGACCGTGAAAGTGCTATCAACATCCTTGATGATAAAATAGCATCTGAATCTGTCGAAGATGAAATGATTAAGGTCTTGAAGGTTGCCATCCAATGCACCACGAAGCTCCCTTCTTTGCGCCCTACCATGAGAGATGTTGTCAAGATGCTTATTGATGCTTATTCTAGCCCTTTTCAATCTCCAGACAGCGATTTTGTGAAAGATGTTAAGGGTTATATCTAG 2727 0.3916 MVRWSFTTAQTFKLFFSLFLLWKKLIILLVLMAKRHLFFFFFRFFTILFIIFPPCMSASIETEALLQFKKHLKDPLNSLGSWIDSESPCEFHGITCDKFSGKVIEISLENKSLSGEIFPSIFDLQSLRVLLLASNFISGKLPFEISNCSNLTVLNLTENDMVGAIPDLSGMRNLKVLDLSANYFSGSFPNWVGNLTGLVSLGLGENEYVESEIPETLGNLKKLTWLYLGGSHLRGEIPESIYEMKALETLDISRNMISGKLSKSILKLKNLYKIELFSNNLTGQIPAELANLTKLEEIDISKNHMHGKLPEVIGTMKNLVVFQLYENNFSGELPAGFGDMQHLVGFSIYRNSFSGKIPENFGRFSPLDSIDISENQFSGKLPSQLGKLMNLEKLYLSNNNFYGEIPAEIGALKQLSSFHLEENSLTGSIPAELGNCARLVDLNFAQNFLTGTIPQSVSLMSSLNSLNLSGNKLTGSIPESLVSMKLSSIDFSKNQLSGRIPNNLLIIGGDEAFVGNPGLCVDQNSRTLMNSEFNICTSIHGPKKVFADKIIILCTIASVLVVLLVVLLVSYGGFKHENADLEKNIKGHKETDSKWKMAAFHQVDLDVNEICNLDEDNLIGTGGTGKVYRVNLKKTRSTVAVKQLWKGNSVKILAAEMETLGKIRHRNILKLYASLFKGGSNYLVLEYMPNGNLFQALHRQIKGGKPELDWYQRYKIALGTAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEAKIADFGVAKFAEKTDQQLGFSCLAGTHGYIAPELAYTCEVTEKSDVYSFGVVLLELLTGREAIEEDYGEGKDIVYWVMTNLDDRESAINILDDKIASESVEDEMIKVLKVAIQCTTKLPSLRPTMRDVVKMLIDAYSSPFQSPDSDFVKDVKGYI 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1952 908 SMART LRR_typ_2 220 244 IPR003591 -
Prci10g1952 908 SMART LRR_typ_2 388 412 IPR003591 -
Prci10g1952 908 SMART LRR_typ_2 124 148 IPR003591 -
Prci10g1952 908 SMART LRR_typ_2 460 484 IPR003591 -
Prci10g1952 908 SMART LRR_typ_2 171 195 IPR003591 -
Prci10g1952 908 SUPERFAMILY Protein kinase-like (PK-like) 610 885 IPR011009 -
Prci10g1952 908 PANTHER LEUCINE RICH REPEAT KINASE 2 212 887 - -
Prci10g1952 908 Pfam Protein kinase domain 615 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1952 908 Gene3D Transferase(Phosphotransferase) domain 1 692 899 - -
Prci10g1952 908 FunFam Leucine-rich repeat receptor-like protein kinase TDR 222 532 - -
Prci10g1952 908 FunFam Leucine-rich receptor-like protein kinase family protein 603 687 - -
Prci10g1952 908 CDD STKc_IRAK 619 885 - -
Prci10g1952 908 SUPERFAMILY L domain-like 113 504 - -
Prci10g1952 908 FunFam leucine-rich repeat receptor-like protein kinase TDR 688 896 - -
Prci10g1952 908 Pfam Leucine rich repeat N-terminal domain 61 97 IPR013210 -
Prci10g1952 908 ProSitePatterns Protein kinases ATP-binding region signature. 619 642 IPR017441 GO:0005524
Prci10g1952 908 Gene3D Ribonuclease Inhibitor 309 404 IPR032675 -
Prci10g1952 908 Gene3D Ribonuclease Inhibitor 405 528 IPR032675 -
Prci10g1952 908 Gene3D Ribonuclease Inhibitor 209 308 IPR032675 -
Prci10g1952 908 Gene3D Phosphorylase Kinase; domain 1 612 691 - -
Prci10g1952 908 Gene3D Ribonuclease Inhibitor 58 208 IPR032675 -
Prci10g1952 908 SMART serkin_6 613 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1952 908 FunFam Probable inactive receptor kinase RLK902 58 216 - -
Prci10g1952 908 ProSiteProfiles Protein kinase domain profile. 613 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1952 908 ProSitePatterns Serine/Threonine protein kinases active-site signature. 735 747 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1952 Prci-Chr10 18498587 18503505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1952 46 898 Receptor kinase-like Gene Family AT1G72180 50.000 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci10g1952 Pkinase 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1952 - - pcin:129322843 1298.88