Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1951 ATGGTGCGTTGGTCATTCACCACGGCACAGACATTCAAATTATTCTTCTCTTTATTTTTGCTTTGGAAGAAACTGATAATTTTGCTCGTCCTAATGGCCAAGAGACACCTTTTCTTCTTCTTCTTCCGGTTCTTTACAATTCTGTTCATCATTTTCCCGCCATGTATGTCCGCAAGTATAGAAACAGAGGCTCTCCTTCAGTTCAAGAAGCATTTGAAGGACCCTTTGAATTCTTTGGGTTCGTGGATAGATTCTGAGTCTCCCTGTGAATTCCACGGCATTACCTGTGATAAATTTTCCGGAAAAGTCATAGAAATTTCACTGGAAAATAAGTCTCTTTCCGGGGAGATTTTCCCGTCAATTTTTGATCTCCAGAGCCTTCGAGTTCTGTTACTTGCATCAAATTTTATTTCTGGGAAGCTTCCATTTGAAATAAGCAATTGCAGCAACCTTACAGTCTTGAACCTAACAGAGAATGACATGGTTGGGGCTATTCCAGACTTGTCTGGGATGAGAAATCTCAAAGTTCTTGACCTCTCAGCAAACTACTTCTCCGGGAGCTTCCCAAACTGGGTTGGAAATTTGACTGGTCTGGTTTCATTGGGGCTCGGGGAAAATGAATATGTTGAGAGTGAAATTCCTGAGACTCTTGGCAATCTGAAGAAATTGACATGGCTCTATCTTGGTGGTTCTCATTTGCGAGGAGAGATTCCAGAATCAATTTATGAAATGAAGGCTCTGGAGACACTGGATATTTCAAGAAACATGATCTCTGGGAAACTCTCCAAGTCAATTTTGAAGCTGAAAAATCTTTATAAGATTGAGCTTTTCTCAAACAATTTAACTGGGCAAATCCCAGCTGAGCTGGCAAACTTGACTAAACTTGAGGAGATTGACATTTCCAAGAACCACATGCATGGTAAATTGCCGGAGGTGATTGGTACTATGAAGAATTTGGTCGTTTTTCAACTCTATGAAAACAACTTTTCTGGAGAACTTCCTGCTGGGTTTGGAGATATGCAACATCTTGTTGGATTCTCAATTTATCGAAACAGCTTCTCTGGGAAAATACCAGAAAATTTTGGCCGATTTTCACCACTGGATAGCATTGATATATCAGAGAATCAATTTTCAGGTGAATTTCCAAAGTTCTTGTGTGAAAATAGAATGTTGAAATTTTTGCTTGCTTTGCAAAATAATTTCTCAGGTGAATTGCCTGAGACTTATGTTACTTGTAAATCACTGGAGAGATTCAGGGTCAGCAGGAATGGTTTGTCTGGAAAAATTCCAGATGAGCTTTGGGCACTTCCATTTGTAAAGATAATTGATTTAGCTGACAATAATTTTGATGGTGATATATCTCCAAAAATTGGGCTCTCTTCTAGCTTAAGTCAGTTAGTTCTAATGAAGAACAAGTTTTCAGGTAAGCTTCCTTCACAACTTGGCAAGCTGATGAATTTGGAGAAGCTATACTTGAGCAACAACAATTTCTATGGTGAAATACCAGCTGAAATTGGAGCTCTGAAGCAATTATCCTCTTTTCATCTAGAAGAGAATTCATTAACTGGATCAATACCTGCAGAACTTGGTAATTGTGCAAGGCTAGTAGACTTGAATTTTGCTCAGAATTTTCTTACTGGCACTATCCCGCAGTCAGTTTCACTTATGAGCTCATTGAACTCTCTTAATCTATCTGGCAACAAACTTACAGGCTCGATCCCAGAAAGCTTAGTGTCAATGAAATTGAGCTCAATTGATTTTTCCAAAAACCAGTTGTCTGGGAGAATTCCGAACAATCTTCTAATTATTGGTGGTGATGAAGCTTTTGTTGGAAACCCAGGACTTTGTGTTGATCAAAATTCAAGAACTCTTATGAATTCTGAATTCAACATTTGTACAAGCATACATGGTCCGAAAAAGGTCTTCGCTGATAAGATAATAATTCTTTGTACCATTGCTTCTGTCTTGGTTGTACTTTTGGTTGTGTTGCTTGTGAGTTACGGAGGCTTCAAGCATGAAAATGCAGATCTGGAGAAAAACATAAAAGGTCATAAGGAAACAGATTCAAAATGGAAAATGGCTGCTTTCCACCAAGTTGATCTTGATGTGAATGAAATATGTAATCTGGATGAAGATAATTTGATTGGAACTGGTGGCACTGGAAAGGTTTATCGAGTTAACTTGAAGAAAACTCGTTCAACAGTGGCTGTAAAACAACTATGGAAAGGAAATAGTGTAAAAATTTTGGCGGCAGAGATGGAGACTTTGGGGAAAATAAGGCATAGAAATATACTTAAGCTTTATGCTTCTTTGTTTAAAGGAGGATCAAACTATTTAGTGTTAGAGTACATGCCAAATGGTAATCTTTTTCAAGCTCTTCACAGACAGATAAAGGGTGGGAAACCAGAATTGGATTGGTACCAGAGATATAAAATTGCACTGGGCACCGCAAAAGGAATTGCCTATTTACATCATGATTGTTCTCCACCTATCATCCACAGAGACATAAAATCCAGTAACATTTTGCTTGATGAGGATTATGAGGCAAAAATTGCTGATTTTGGGGTCGCAAAATTTGCAGAAAAAACTGATCAGCAGTTGGGTTTTAGCTGTCTTGCTGGCACTCATGGTTATATTGCTCCTGAGCTGGCTTATACATGTGAAGTCACTGAAAAGAGTGATGTGTATAGTTTTGGAGTGGTGTTGCTGGAATTACTTACAGGAAGGGAAGCCATTGAAGAGGATTACGGAGAAGGGAAAGATATTGTATATTGGGTTATGACGAATCTGGATGACCGTGAAAGTGCTATCAACATCCTTGATGATAAAATAGCATCTGAATCTGTCGAAGATGAAATGATTAAGGTCTTGAAGGTTGCCATCCAATGCACCACGAAGCTCCCTTCTTTGCGCCCTACCATGAGAGATGTTGTCAAGATGCTTATTGATGCTTATTCTAGCCCTTTTCAATCTCCAGACAGCGATTTTGTGAAAGATGTTAAGGGTTATATCTAG 3015 0.3874 MVRWSFTTAQTFKLFFSLFLLWKKLIILLVLMAKRHLFFFFFRFFTILFIIFPPCMSASIETEALLQFKKHLKDPLNSLGSWIDSESPCEFHGITCDKFSGKVIEISLENKSLSGEIFPSIFDLQSLRVLLLASNFISGKLPFEISNCSNLTVLNLTENDMVGAIPDLSGMRNLKVLDLSANYFSGSFPNWVGNLTGLVSLGLGENEYVESEIPETLGNLKKLTWLYLGGSHLRGEIPESIYEMKALETLDISRNMISGKLSKSILKLKNLYKIELFSNNLTGQIPAELANLTKLEEIDISKNHMHGKLPEVIGTMKNLVVFQLYENNFSGELPAGFGDMQHLVGFSIYRNSFSGKIPENFGRFSPLDSIDISENQFSGEFPKFLCENRMLKFLLALQNNFSGELPETYVTCKSLERFRVSRNGLSGKIPDELWALPFVKIIDLADNNFDGDISPKIGLSSSLSQLVLMKNKFSGKLPSQLGKLMNLEKLYLSNNNFYGEIPAEIGALKQLSSFHLEENSLTGSIPAELGNCARLVDLNFAQNFLTGTIPQSVSLMSSLNSLNLSGNKLTGSIPESLVSMKLSSIDFSKNQLSGRIPNNLLIIGGDEAFVGNPGLCVDQNSRTLMNSEFNICTSIHGPKKVFADKIIILCTIASVLVVLLVVLLVSYGGFKHENADLEKNIKGHKETDSKWKMAAFHQVDLDVNEICNLDEDNLIGTGGTGKVYRVNLKKTRSTVAVKQLWKGNSVKILAAEMETLGKIRHRNILKLYASLFKGGSNYLVLEYMPNGNLFQALHRQIKGGKPELDWYQRYKIALGTAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEAKIADFGVAKFAEKTDQQLGFSCLAGTHGYIAPELAYTCEVTEKSDVYSFGVVLLELLTGREAIEEDYGEGKDIVYWVMTNLDDRESAINILDDKIASESVEDEMIKVLKVAIQCTTKLPSLRPTMRDVVKMLIDAYSSPFQSPDSDFVKDVKGYI 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1951 1004 Gene3D Phosphorylase Kinase; domain 1 708 787 - -
Prci10g1951 1004 SUPERFAMILY L domain-like 85 404 - -
Prci10g1951 1004 FunFam Leucine-rich repeat receptor protein kinase EMS1 237 321 - -
Prci10g1951 1004 Gene3D Transferase(Phosphotransferase) domain 1 788 995 - -
Prci10g1951 1004 SMART LRR_typ_2 556 580 IPR003591 -
Prci10g1951 1004 SMART LRR_typ_2 220 244 IPR003591 -
Prci10g1951 1004 SMART LRR_typ_2 124 148 IPR003591 -
Prci10g1951 1004 SMART LRR_typ_2 171 195 IPR003591 -
Prci10g1951 1004 SMART LRR_typ_2 484 508 IPR003591 -
Prci10g1951 1004 SUPERFAMILY RNI-like 308 600 - -
Prci10g1951 1004 Gene3D Ribonuclease Inhibitor 343 626 IPR032675 -
Prci10g1951 1004 FunFam Probable inactive receptor kinase RLK902 58 216 - -
Prci10g1951 1004 FunFam Leucine-rich receptor-like protein kinase family protein 699 783 - -
Prci10g1951 1004 CDD STKc_IRAK 715 981 - -
Prci10g1951 1004 ProSitePatterns Protein kinases ATP-binding region signature. 715 738 IPR017441 GO:0005524
Prci10g1951 1004 Pfam Protein kinase domain 711 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1951 1004 Pfam Leucine rich repeat N-terminal domain 61 97 IPR013210 -
Prci10g1951 1004 ProSiteProfiles Protein kinase domain profile. 709 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1951 1004 FunFam leucine-rich repeat receptor-like protein kinase TDR 784 992 - -
Prci10g1951 1004 FunFam Receptor-like protein kinase HSL1 322 625 - -
Prci10g1951 1004 SUPERFAMILY Protein kinase-like (PK-like) 706 981 IPR011009 -
Prci10g1951 1004 Gene3D Ribonuclease Inhibitor 58 207 IPR032675 -
Prci10g1951 1004 Gene3D Ribonuclease Inhibitor 208 268 IPR032675 -
Prci10g1951 1004 Gene3D Ribonuclease Inhibitor 269 342 IPR032675 -
Prci10g1951 1004 SMART serkin_6 709 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1951 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 831 843 IPR008271 GO:0004672|GO:0006468
Prci10g1951 1004 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 244 982 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1951 Prci-Chr10 18498587 18503505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1951 46 994 Receptor kinase-like Gene Family AT1G72180 56.846 0.0 1072
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci10g1951 Pkinase 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1951 - - pcin:129322843 1911.35