Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1918 ATGGGAAGAGATCCGGGGAAATGGATAAAGACCTTGTTTTCAGGGAAGAAATCACCAAAGTCTAATCGATCAAGCAAAAAAAATATCTTGAAACCTTCAAGCAACCTGGATGTGCTGGCCTGTATTGAGGCACCTGTGCCTTATATTCCTGATTCTTCACTGATATCCCCACCTACATCTGGATCTGATGCTAGTAAAGAAGTGCTCTTGGAAAAGGTAGTTGTTTGTAGATCATCAAATGACGGGAACATTCTCTCAGCTGGGGTTGAAGAGAACAATGCAGAAGCTGTTGATTCCGGCTCACTGGATGATGCTGATAAAATCAGGCTTGCTGAAGCTGCTATAAAAATTCAGGCTGGTTTTAGGAGCTATCAGGCATGGCGGGCATTTCAAACATTAAAAGGTGTCATACAACTGCAAGCTCTTATTCGAGGCCACTTGGTTAGAAGGCAGGCTGTTTCTACTTTATACTGTGTGAAGGGAATTGTAAAAGTTCAAGCGTTAGTTCGTGGTCACAAGGTTAGACATTCTGATATTGGGATTGCTGTCCTCAAAAATTTCAAGGATACTAAATGTTCAAATTCTACTGGAGTAGTTACAACTGCTCCGGCAGAGAAGCTGTCAACCAGTGTCTTTGTTAACAAGCTTCTGGCCTCCTCATCCTCACCAGTTTCTTTCCATCTTAATTTTGATCCTGGACAACCTAGCTTCACTTGGAAGTGGCTTGAGCGTTGGACAAGGTCAAACTTTTGGGCACCTCTTCCCAAATCAGAGAAGAAACTTGACTTAAAGTCCAATGAGAAGAGTAGCAATTGTCAAACGTTTGAAAATAACAAGGGGAAAGCTAAAAGAAATATCAAGAAAGATTCTGGTTTGAAAGTCGATGATGGCTTGACCTCAGAGTCAAACAAACTTAAACAGCCTGCAAAAAAGGTTTCAAGCCACCCAGTGCAGTCATGTCAGGAACATCCACAAAAAGAAATAAAAAATCATATTAAGAAGTCTTCGACGCAGAGTGTTTCTAGTAGATCTGAGGTTGCCCCTGAGAAAAAGAAACACATCACTGGAAAACTTTCGGGTCATGCCGTCACTGATGTTTCAGAGCAGGGTGCTCGTGTTTCAGCAGATAAAAAGAAAAATTTGGGTGTGTCAAAATCAAAGCAATCTGATCTTGAAAAAAGCCTTGGATTGCAAGCAAAAGATGAGCATGGGGAATCACACAATCATTCTATTGCTGAGTCGCAGACTAGTTTAAAGAATGGTAGAGAAGTTGGTCGCGAAGACAGTGAGGACTTGAAAATTACTATGAACTTTCCGAACTCCCTAAGAAGAGCTTCACTGCCTGGCAATTTCAATGATCAATATAATGACAGTTCTCATAGCACTCCAAGACTTCCTAGCTATATGGCCCCTACTGAATCTGCAAAAGCTAAGCTAAGAGCTCAAGGCTCTCCTAGGCTTGCTGGTGACTTGGTGGATAAAAATGGTATAACCAGGCGTTATTCATTCACTTCTTCATTAAATGGCAAGTTTGGCTTATTTTCCCCAAGACCAGAACGACTGTTAAACACAGGCAGCAGAGGAATGATCAGGACTGATATATCTCTGTCATCATTAAGGGATGGTGCTGATTAG 1635 0.4159 MGRDPGKWIKTLFSGKKSPKSNRSSKKNILKPSSNLDVLACIEAPVPYIPDSSLISPPTSGSDASKEVLLEKVVVCRSSNDGNILSAGVEENNAEAVDSGSLDDADKIRLAEAAIKIQAGFRSYQAWRAFQTLKGVIQLQALIRGHLVRRQAVSTLYCVKGIVKVQALVRGHKVRHSDIGIAVLKNFKDTKCSNSTGVVTTAPAEKLSTSVFVNKLLASSSSPVSFHLNFDPGQPSFTWKWLERWTRSNFWAPLPKSEKKLDLKSNEKSSNCQTFENNKGKAKRNIKKDSGLKVDDGLTSESNKLKQPAKKVSSHPVQSCQEHPQKEIKNHIKKSSTQSVSSRSEVAPEKKKHITGKLSGHAVTDVSEQGARVSADKKKNLGVSKSKQSDLEKSLGLQAKDEHGESHNHSIAESQTSLKNGREVGREDSEDLKITMNFPNSLRRASLPGNFNDQYNDSSHSTPRLPSYMAPTESAKAKLRAQGSPRLAGDLVDKNGITRRYSFTSSLNGKFGLFSPRPERLLNTGSRGMIRTDISLSSLRDGAD 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1918 544 MobiDBLite consensus disorder prediction 261 429 - -
Prci10g1918 544 MobiDBLite consensus disorder prediction 301 321 - -
Prci10g1918 544 MobiDBLite consensus disorder prediction 280 295 - -
Prci10g1918 544 ProSiteProfiles IQ motif profile. 134 161 IPR000048 GO:0005515
Prci10g1918 544 SMART iq_5 109 131 IPR000048 GO:0005515
Prci10g1918 544 SMART iq_5 132 153 IPR000048 GO:0005515
Prci10g1918 544 SMART iq_5 157 179 IPR000048 GO:0005515
Prci10g1918 544 MobiDBLite consensus disorder prediction 394 409 - -
Prci10g1918 544 Pfam IQ calmodulin-binding motif 160 175 IPR000048 GO:0005515
Prci10g1918 544 Pfam IQ calmodulin-binding motif 112 128 IPR000048 GO:0005515
Prci10g1918 544 Pfam IQ calmodulin-binding motif 134 151 IPR000048 GO:0005515
Prci10g1918 544 Pfam Protein of unknown function (DUF4005) 454 528 IPR025064 -
Prci10g1918 544 PANTHER IQ-DOMAIN 5-RELATED 1 503 - -
Prci10g1918 544 ProSiteProfiles IQ motif profile. 160 186 IPR000048 GO:0005515
Prci10g1918 544 Gene3D - 108 157 - -
Prci10g1918 544 MobiDBLite consensus disorder prediction 371 386 - -
Prci10g1918 544 ProSiteProfiles IQ motif profile. 110 138 IPR000048 GO:0005515
Prci10g1918 544 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 175 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1918 Prci-Chr10 17733200 17738955 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1918 1 541 IQD Protein Family AT1G14380 32.879 4.97e-74 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1918 - - aprc:113869184 523.087