Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1913 ATGCCAAATGCCAATTTTTGTCTCCTGGAGAATATGAAAATTTTCTCGGTTTCTTCGTTTTTCTTGTTCTCTACAATCATTCTTGCTCTTCTTGGTCCGATTTCAACGGCAAAATTGATCACAAGCGAGAGAAGAATTCTTTTCCAGGCTGAGAGGTTGCTTGAGTATCCTCAGGTTCTTAGAGGATGGAGGAAATGGACCAACTTCTGCTATCTCCCTCCGTCACCTTCTCTCAAGATTGTCTGCTCCAACGGCCATGTGACTGAATTAACCATTGTTGGGGACAAGGTCTCGTCATCATCTTCTCAAACTCTTTCAGAAAGATTCTCCATTGATTCTTTCTTCACTGTGTTGACGAAACTGTCAAGTTTGAAGGTACTGTCACTTGTGTCTTTAGGCTTGTGGGGTCCTTTGCCTGCCAAGATAGACAGGTTCTGGTCACTTGAAGTTCTGAACATTAGCTCAAATCACATAGATGGTGAAATCCCATCATCAATCCGTTTTATAAAAAGTCTCAGGGTTCTGAATCTGGCTGATAATTTGTTCAATGGCAGTGTCCCAGATCTGAAAGCACTAGCTTTTCTTGAAGAACTTAATCTGGGTGAAAACAAACTGGGTTCTGAATTCCCCTCACTGGGTAACAATCTTGTTAGAATTATCCTGAAATACAATTCTTTTAGGTTTCAGATTCCCTCCAGAATCATGTATTTTCACAAACTTGAAGAATTTGACATCTCTTCCAATGAATTTTCTGGACCCATCCCACCTTCTCTGTTCTCTCTTCCTTCCATTGTCCACATAAACTTAGCTCAAAACCAGCTTACTGGTGACTCCTCTGTGAACATAAACTGTAGTTCAAAGCTAACATTTGTGAATCTCTCGGACAACCTTTTAATGGGGAAATTTCCACCTTGTTTTGGATCATCAAAGTCCTCAAATCGCACGGTGTTGTATTCTGGGAACTGCTTTTCAGCTAGAAGCTTAACAGGCATGCATCAACATCCATCTTCATACTGTATTAAGGAGAAGGCCATAGCTGTGAAGCCTGTGGAGAGAAGCCAGAAGAAGGAGACAGGTATGAGAATTCTTGCAACCATTGGAGTCATTGGAGGTTCTGTTGGATTCGCTGTGATTCTGTCACTGTTCATTGTGTTCGTATGGAGGAAGTGCAAAGAAGACAGAGCAGATGATGATAAAGATTTAGACAGATCTGCTACTCATAAGCTCCGAAGACCAAACATTGATTCAAGACGTGTTCCTCAGACAATGAGGCTATCTGCACTTGGACTCCCACCATACAGAATTTTCTCATCAGAGGACATTGAAGAAGCAACAAACAACTTTGATCCATCAAATCTAATATCAGAAGGATCTAAAGGCAAGATATATAAAGGTTGGCTCAGTGATGGTTCAGAGGTCCTTTTCAACTGTGTAGAAGTAACACACAAGAATTTGACCCAAAGTCTGATGAAGAAACACATAGAGGTGTTACCCTGTCTGAGGCACAGACATTTGGTAAGTGTGCTAGGACACTGTATCATTACTCCTCAAGACCATTCTCAACCAAGAAGCACAGTCTTCATTGTCCTTGAGCGCTTTTCAAATGGGTCATTGAGATATCATCTTTCAGATTTGAGAAAGAAGCAAGTGCTGAAATGGCCACAGAGAATGGCAATAAGCATAGGAATTGCAAGAGGGACCCAGTTCTTGCACACAGGGGTTGTTCCTGGCATATTTGGCAACGATTTAAAGATTGACAACATTTTGCTAGATGATAATCTCAACCCAAAAGTTAGTGGATATAATATTCCATTGCTATATAAGAATGGTTTTGAGAGTACTCTTCTTGAGCAAAGTGGCCCCCATCATGGCGCAAGAACTGATCCAGCAGCAGAAAAAGAAGACATTTATCAGTTGGGCGTTATTCTTCTTGAAGTTATTACTGGCAAACGGCTTTCCTCTTCCAGTGAAATAGAGGATTTGAAAGATGAGTTGGAGAGAGGATTATCAGAAGCAGCATCAACACTGAGAAGTGCAATAGATCCAACCATCCAAGGAACTTATGCATATGAATCACTAAGGACTGCAATTCAAATCACAATCAACTGTCTATGTGAGGTTCCAAATAAGCGACCTTCAATAGAGGATGTCCTTTGGAACTTGCAGTATTCACTACAAGTACAAGAGTCATGGACCAGCAGTGGAAACCTTGGTACAAAGTTTTAG 2226 0.4102 MPNANFCLLENMKIFSVSSFFLFSTIILALLGPISTAKLITSERRILFQAERLLEYPQVLRGWRKWTNFCYLPPSPSLKIVCSNGHVTELTIVGDKVSSSSSQTLSERFSIDSFFTVLTKLSSLKVLSLVSLGLWGPLPAKIDRFWSLEVLNISSNHIDGEIPSSIRFIKSLRVLNLADNLFNGSVPDLKALAFLEELNLGENKLGSEFPSLGNNLVRIILKYNSFRFQIPSRIMYFHKLEEFDISSNEFSGPIPPSLFSLPSIVHINLAQNQLTGDSSVNINCSSKLTFVNLSDNLLMGKFPPCFGSSKSSNRTVLYSGNCFSARSLTGMHQHPSSYCIKEKAIAVKPVERSQKKETGMRILATIGVIGGSVGFAVILSLFIVFVWRKCKEDRADDDKDLDRSATHKLRRPNIDSRRVPQTMRLSALGLPPYRIFSSEDIEEATNNFDPSNLISEGSKGKIYKGWLSDGSEVLFNCVEVTHKNLTQSLMKKHIEVLPCLRHRHLVSVLGHCIITPQDHSQPRSTVFIVLERFSNGSLRYHLSDLRKKQVLKWPQRMAISIGIARGTQFLHTGVVPGIFGNDLKIDNILLDDNLNPKVSGYNIPLLYKNGFESTLLEQSGPHHGARTDPAAEKEDIYQLGVILLEVITGKRLSSSSEIEDLKDELERGLSEAASTLRSAIDPTIQGTYAYESLRTAIQITINCLCEVPNKRPSIEDVLWNLQYSLQVQESWTSSGNLGTKF 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1913 741 Gene3D Phosphorylase Kinase; domain 1 414 519 - -
Prci10g1913 741 SMART serkin_6 448 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1913 741 SUPERFAMILY L domain-like 66 323 - -
Prci10g1913 741 Pfam Leucine Rich Repeat 147 167 IPR001611 GO:0005515
Prci10g1913 741 ProSiteProfiles Protein kinase domain profile. 448 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1913 741 Pfam Protein kinase domain 453 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1913 741 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 359 730 - -
Prci10g1913 741 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 533 736 - -
Prci10g1913 741 Gene3D Ribonuclease Inhibitor 217 341 IPR032675 -
Prci10g1913 741 Gene3D Ribonuclease Inhibitor 40 216 IPR032675 -
Prci10g1913 741 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 40 214 - -
Prci10g1913 741 Gene3D Transferase(Phosphotransferase) domain 1 533 734 - -
Prci10g1913 741 SUPERFAMILY Protein kinase-like (PK-like) 426 721 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1913 Prci-Chr10 17610931 17616871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1913 56 736 Miscellaneous Gene Families AT3G03770 40.706 1.04e-172 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Prci10g1913 Pkinase 8.5e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1913 - - jre:108989808 837.795