Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1903 ATGTATTTCTTCGAAATCCTTCAACAAGATCATCATCATCAACAAGACGAGGCTAAAAATGCTGCTACATTAATAGGCACAGAAGACCATAGCACTAGTAGTACTCATCATGAACAATACAATATTACCAGAGAAGAGAATGAACTAGTCTCTCTTTCTCTAGGGTTTTCTTCATCCAAAGATCAGAATTACAAAAGTTGCAATTATAGAAGTTCTCTGAGAGAGGACGATGAGAAGGATTTGGGACAATCATCATCAGGGCTTGCTCTAGGGCTTGATGTCAGATTTGACCCTACATCATCATCATCAGCTGAAGTTGAAAGGACAAACATCATAACCATTGAAGGCACCTCTGATGATGATGATGAGATGCAGCCACACAGTAAGGTTCTCAAGAAGATGAGGACTTCTGAAGATCACAGTATTACTACTTGTAAAGCTACTCAACAACTTCATCATCAGCTCAAGAAAACTAGGGTTTCTATCCGAGCCAGATGTGATACCCAAACGATGAATGATGGATGTCAATGGAGAAAATATGGACAGAAAATAGCAAAGGGAAATCCATGCCCAAGGGCGTACTACAGATGCACTGCGTCACTATCTTGCCCTGTCAGAAAACAGGTGCAAAGATGTGCTGAGGATATGTCCATCTTGATAACCACTTATGAAGGAACTCATGATCACCCTCTACCTATCTCATCACCCACACCTTTCACCTCCTTATCCTCCATTATTGCTCCTCTGGCTCCTCCTCCATCTTCGTCACAACAAAATACAAAATTCGCCACGAAAATTTACAACGAAAATCAGGAAAAGTCTTTACCCTCCATAATCTTCAATAATAATGTTCTCAATAGCTTGTCTAGTGCCTCTTCCATTTCAAGACCATCACCACCACCATATCAGCTTCTGTATTTCCCAAACTCTTCCATTATCTCTATTTCACCACCACCACCACCTTCTTCTTCTTCCTCCTCATCCTCCTCCTCTCATCATCAGTTCATCAGAACATTCACTTCCTCGGGCTTCTCTTCCATTAATGGAACCGTACTACTGGCCCCCCACCAGATGAACAGATCAAGCCAAAGCAGTGATGTTAAAGAACCATTAACAATTGAAGATAAAACAAAAGCAGTCACCAGTACTAATCCCAAGTTTCAGTCAGCCAATATTGCAGCAGCTCTCACTTCCTACGTCAATACTAATAATAATGGAGGTAACAGAAATGGCTTGGACTGCATATCTCATCAACATCAAGCGTCTAGAAGCGGCTATAACTCTGGTTCCGCTTATTCAGATAGAAGCAAGCTGATGCTGGAACAGTGGAAGAGAAAGAATTTGACTATTGCTCCGAAGGAATCAAACCTCTGA 1374 0.4141 MYFFEILQQDHHHQQDEAKNAATLIGTEDHSTSSTHHEQYNITREENELVSLSLGFSSSKDQNYKSCNYRSSLREDDEKDLGQSSSGLALGLDVRFDPTSSSSAEVERTNIITIEGTSDDDDEMQPHSKVLKKMRTSEDHSITTCKATQQLHHQLKKTRVSIRARCDTQTMNDGCQWRKYGQKIAKGNPCPRAYYRCTASLSCPVRKQVQRCAEDMSILITTYEGTHDHPLPISSPTPFTSLSSIIAPLAPPPSSSQQNTKFATKIYNENQEKSLPSIIFNNNVLNSLSSASSISRPSPPPYQLLYFPNSSIISISPPPPPSSSSSSSSSSHHQFIRTFTSSGFSSINGTVLLAPHQMNRSSQSSDVKEPLTIEDKTKAVTSTNPKFQSANIAAALTSYVNTNNNGGNRNGLDCISHQHQASRSGYNSGSAYSDRSKLMLEQWKRKNLTIAPKESNL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1903 457 ProSiteProfiles WRKY domain profile. 166 232 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci10g1903 457 SUPERFAMILY WRKY DNA-binding domain 164 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci10g1903 457 FunFam probable WRKY transcription factor 31 156 233 - -
Prci10g1903 457 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 31 410 IPR044810 GO:0003700
Prci10g1903 457 SMART WRKY_cls 171 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci10g1903 457 Pfam WRKY DNA -binding domain 172 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci10g1903 457 Gene3D WRKY domain 155 233 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1903 Prci-Chr10 17485284 17488320 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1903 4 232 WRKY Transcription Factor Family AT1G18860 42.678 2.95e-47 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci10g1903 WRKY 1.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1903 - - pcin:129295149 780.785