Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1860 ATGACGTCGTCGACTTTGAATTCGCTGGAGACGAACATCGACGTCGTAGACTACTACAAGATACTTCAAGTGTCACGTAAAGCGAATGACGAGGAATTGAAGAAGGCGTACAAAAGACTGGCGATGAAGTGGCACCCAGACAAGAATAATCAAAGTCCCTTGAAGATGAAAGAAGCAGAGACCAAGTTCAAACAGATATCAGAGGCTTACGATGTTCTCGGAAACCCTATGAAGCGAAAGATCTATGACGATGGCCAAATAAGTCCTCTTATAAATAATAATATGACGACGAAGACGACGACCAATACGAATTCTACTACTAGGAAGCGGAAGACCTGTGATTTTGGTTCTCATCAGAATCCTGTCAATAAATTCGAAAGGGTTGAACTGAGAAATCCTGATGACATATTGAAAGCCGCAACCTCAGAACACAAGCTGGTTTTCAGCCTCGACGATCTTTACAAGGGCTGCGAACGAAGATTGAGAATCTCAAGGAATGTTATTGATGCTTTTGGAAACATGATGACTGTTGATGAAATATTGACTATAGACGTGAAGCCTGGTTGGAAGAAGGACACTAAGATAACTTATCCTGGAAAAGGTAATCAAGCACCAGGATTTCCTTGTCCTGCTGATCTGGTATTTGTGGTGGACGAGAAACCTCACGCCATTTTTAAGAGAGAAGGAAATGATTTGGTGACCACTCAGAAGATTTCACTTATAGAGGCTCTCACGGGAAAGACAATCAAAGTTACAACGTTGGATGGGCGAGAAATTGAAGTTTCTGTCACAGATATTGTGAAACCAGACACTGAGATTGTGATCCAAGACGAAGGCATGCCATCCACAAGTAAACCAGGCACAAAAGGAAACCTCAGAATTAAGTTTGATATAATTTTTCCTACGCAGCTTACTGCTTCGCAGAAGAGTGAACTGAAAAATATTTTTAGTCTAGTTGATAATTAA 966 0.411 MTSSTLNSLETNIDVVDYYKILQVSRKANDEELKKAYKRLAMKWHPDKNNQSPLKMKEAETKFKQISEAYDVLGNPMKRKIYDDGQISPLINNNMTTKTTTNTNSTTRKRKTCDFGSHQNPVNKFERVELRNPDDILKAATSEHKLVFSLDDLYKGCERRLRISRNVIDAFGNMMTVDEILTIDVKPGWKKDTKITYPGKGNQAPGFPCPADLVFVVDEKPHAIFKREGNDLVTTQKISLIEALTGKTIKVTTLDGREIEVSVTDIVKPDTEIVIQDEGMPSTSKPGTKGNLRIKFDIIFPTQLTASQKSELKNIFSLVDN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1860 321 CDD DnaJ_C 143 304 - -
Prci10g1860 321 MobiDBLite consensus disorder prediction 97 118 - -
Prci10g1860 321 ProSitePatterns Nt-dnaJ domain signature. 63 82 IPR018253 -
Prci10g1860 321 FunFam Dnaj homolog subfamily b member 138 220 - -
Prci10g1860 321 SUPERFAMILY Chaperone J-domain 13 89 IPR036869 -
Prci10g1860 321 Gene3D - 221 320 - -
Prci10g1860 321 CDD DnaJ 17 75 IPR001623 -
Prci10g1860 321 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 17 316 - -
Prci10g1860 321 Gene3D - 141 220 - -
Prci10g1860 321 FunFam DnaJ subfamily B member 13 222 302 - -
Prci10g1860 321 Pfam DnaJ domain 17 83 IPR001623 -
Prci10g1860 321 Gene3D DnaJ domain 4 112 IPR036869 -
Prci10g1860 321 SUPERFAMILY HSP40/DnaJ peptide-binding domain 225 310 IPR008971 GO:0006457|GO:0051082
Prci10g1860 321 SUPERFAMILY HSP40/DnaJ peptide-binding domain 144 222 IPR008971 GO:0006457|GO:0051082
Prci10g1860 321 Pfam DnaJ C terminal domain 143 301 IPR002939 -
Prci10g1860 321 SMART dnaj_3 16 78 IPR001623 -
Prci10g1860 321 PRINTS DnaJ domain signature 37 52 IPR001623 -
Prci10g1860 321 PRINTS DnaJ domain signature 19 37 IPR001623 -
Prci10g1860 321 PRINTS DnaJ domain signature 58 78 IPR001623 -
Prci10g1860 321 ProSiteProfiles dnaJ domain profile. 17 86 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1860 Prci-Chr10 16306477 16308345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1860 18 83 C2H2 Transcription Factor Family AT1G74250 35.821 8.68e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1860 K09510 - rcu:8287038 319.316