Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1842 ATGAGTGGATGGGACAGAGTTCGAGCATCATCGTCTTCTTCGGGATCGTCTCCTGGAATGGGTTCCAATCCCATGCGTAACCTCCCCAACCGCATACCTTCGAGTCGAACTGTTCAACTCGGCCGGGTCCAGCCCCAAGCCCCTGGCCACCGCACCGTTTTCTGCAACGATCGCGATGCGAATCTTCCCGTTCGATTCAAGGGGAATTCGATATCAACCACAAAATACAATCTTCTCACTTTCTTGCCGAAAGCTCTGTTTGAACAGTTCAGGCGGGTGGCTAATCTATACTTTCTTACAATTTCTATTTTGTCTACCACACCTATCAGTCCTGTATCTCCAATAACTAATGTGGCTCCTCTATCACTGGTGCTTCTTATCTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAGCGTTTTCAGAATGACTTGGCTGTAAACAATAATTTGATTGACGTTTTGCAAGACCAAAAGTGGGTTTCCATACCCTGGAAAAGGTTGCGAGTTGGAGATGTTGTCAGGGTTAAGCAGGATGGGTTCTTTCCTGCAGATCTGCTTTTTCTGGCTAGTACCAATCCTGATGGAGTCTGCTACATTGAGACTTCCAATTTGGATGGAGAAACCAATTTGAAGATTAGGAAAGCATTGGAAAAGACTTGGGATTACCAGACTCCAGAGAAGGCATCTGAGTTTAAAGGTGAAGTTCAGTGTGAACAGCCAAACAATTCATTGTATACCTTCACAGGGAATCTTATAATTCAAAAGCAAACACTGCCTCTCAGTCCAAACCAACTTTTGTTGCGAGGATGCAGTCTCAGGAATACAGAGTATATTGTTGGGGTTGTTATTTTTACCGGACATGAAACTAAGGTAATGATGAATACGATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGAAAACTTGACAAGCTCATACTTGCTCTATTTGTGACTCTTTTTGTGATGTGCTTACTTGGAGCCATTGGCAGTGGCATCTTCGTAAACAACAAGTATTTCTACTTACGTCTTAATGCAGGTGATGAGGGTTCTGGGCAGTTCAACCCAAGGAATAGAATTTTGGTTATTACTTTGACCATGTTTACCCTCATCACCTTGTACTCGACAATCATCCCCATTTCACTTTATGTGTCAATAGAGATGATCAAATTTATTCAGTGCACTCAGTTTATCGACAAAGATTTGCGCATGTACCACAGTGAGACCAACACCCCTGCATTGGCCAGAACTTCCAATCTAAATGAAGAACTTGGGCAGGTGGAATACATCTTCTCTGACAAAACCGGGACTCTAACAAGAAACTTAATGGAGTTCTTCAAGTGTTCAATTGGAGGGGAGATCTATGGAAATGGCATCACTGAAATTGAGAGAGGAATAGCTGAGCGCAATGGCATTAAACTTCAGGAAAATGGATCAACCAATGCAGTGCAAGAAAAGGGTTTTAATTTTGATGATCCGAGGCTTATGCGTGGAGCATGGAGGAATGAGCCTAATCCTGATAGTTGCAAGGAATTCTTCAGATGCCTTGCTATATGCCATACTGTACTTCCTGAGGGAGATGAGTCCCCTGAAAAGATCAGATATCAAGCTGCATCACCTGATGAGGCTGCTTTGGTCATTGCTGCAAAGAACTTCGGTTTTTTCTTCTACAGGCGCACACCTACCTCAATATATGTTCGTGAATCTCATGTTGAGAAGATGGGTAAAATTCAGGATGTGTCTTATGAGATTTTGAATGTGCTTGAGTTTAACAGTACAAGGAAGCGTCAGTCTGTTGTATGTCGTTATCCAGATGGGAGACTTGTGTTGTATTGTAAGGGTGCTGATAGTGTAATCTATGAGAGATTGGCTGATGGTTATAGGGATATAAAGAAAGTGACTAGGGATCATTTGGAGCAATTTGGATCTGCTGGACTACGTACTTTATGCCTAGCCTACAAAGAACTGCCTCCTGATGCGTATGAAAACTGGAATGAAAAGTTCATCCAAGCCAAATCATCTCTTCGTGATCGTGAAAAGAAGTTAGATGAGGTGGCAGAGCTTATAGAAAATGGTCTTATTTTGATTGGTTGCACTGCCATAGAAGACAAGCTTCAAGAAGGAGTACCAGCTACAATAGAGACTCTTCAAAGGGCCGGCATTAAAATTTGGGTTCTTACAGGGGATAAGATTGAAACAGCCATAAATATTGCCTATGCATGCAATCTAATAAACAATGAGATGAAGCAATTTGTTATCAGTTCTGAAACTGATGTAATTAGAGAAGCTGAGGAAAGGGGTGACCTAGTGGAAATTGCACGTGTTACTAAGGAAGAAGTGAAAAAAGAACTGAAGAAGTGCCTTGAGGAAGCACAGAGCTACCTTTCATCGCTATCTGGACCCAAATTAGCACTTGTAATTGATGGAAAATGTCTAATGTATGCATTAGATCCTAGTTTAAGAGTGACGCTGCTGAACTTGAGTTTAAATTGTCATGCAGTTGTTTGCTGCCGAGTTTCTCCTTTACAGAAGGCACAGGTCACAAGTTTGGTAAAAAAAGGTGCACGGAAAATAACACTTAGTATTGGTGATGGAGCAAATGATGTCAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCATAAGTGGGTTGGAGGGGATGCAAGCAGTAATGGCTAGTGATTTTGCCATTGCACAGTTTCGGTACCTTGCAGATTTATTGCTTGTTCATGGCCGGTGGTCATATCTTCGAATATGCAAGGTGGTGACATACTTCTTTTACAAGAATCTCACATTCACTCTCACTCAGTTTTGGTTTACTTTTCAAACTGGATTTTCTGGTCAGAGGTTCTATGATGATTGGTTTCAGTCATTATATAATGTGATATTCACAGCGCTACCAGTGATCATTGTCGGACTATTTGACAAGGATGTCAGTGCATCTCTTTCCATGAAGTACCCTGAGCTGTACATGGAGGGGATAAAAAATGTCTTCTTCAAATGGAGAGTTGTGGCAATATGGGCCTTTTTTTCGGTTTACCAGTCTCTAATATTATACTATTTTGTTAGTACAGCAAGCTTAAGTGCTAAAAATTCAGCTGGCCTAACATTTGGAGTTTGGGATGTCAGTACAATGGCGTTCACATGTGTTGTAATAACAGTGAACTTGCGGCTTCTTATGATTTGTAATTCAATTACAAAGTGGCACACTATTAGCGTTGGTGGAAGTATATTAGCATGGTTTATTTTTGCTTTCATATATTGTGCCATCCTTGGAAAGGGGAATACTTATTTTGCCATATTTGTCTTGATGAGTACGATCTATTTCTACCTCACAATTATTTTAGTACCAGTGGGTGCACTTTTTGGTGACTTTGTTTATCAAGGGGTTCAAAGATGGTTCTTCCCTTATGACTATCAGATTGTTCAGGAAATGCATCGGCACGAAGTGGAGGGCACTAGCAGGGCACAGCTGCTGGAGATAGAGAACCAGCTAACACCAGCTGAGGCAAGAACTTATGCCATATCTCAACTCCCGCGTGAAATATCAAAGCATACAGGGTTTGCTTTTGATTCACCTGGGTATGAGTCCTTTTTTGCTGCACAGTTAGGTGTATATGCCCCACAAAAGGCATGGGATGTTGCGAGACGAGCTAGTGCCAGGTCAAAGCCCAAAATCTTAAAAAAAATGATAAATTGA 3699 0.4152 MSGWDRVRASSSSSGSSPGMGSNPMRNLPNRIPSSRTVQLGRVQPQAPGHRTVFCNDRDANLPVRFKGNSISTTKYNLLTFLPKALFEQFRRVANLYFLTISILSTTPISPVSPITNVAPLSLVLLISLIKEAFEDWKRFQNDLAVNNNLIDVLQDQKWVSIPWKRLRVGDVVRVKQDGFFPADLLFLASTNPDGVCYIETSNLDGETNLKIRKALEKTWDYQTPEKASEFKGEVQCEQPNNSLYTFTGNLIIQKQTLPLSPNQLLLRGCSLRNTEYIVGVVIFTGHETKVMMNTMNVPSKRSTLERKLDKLILALFVTLFVMCLLGAIGSGIFVNNKYFYLRLNAGDEGSGQFNPRNRILVITLTMFTLITLYSTIIPISLYVSIEMIKFIQCTQFIDKDLRMYHSETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGNGITEIERGIAERNGIKLQENGSTNAVQEKGFNFDDPRLMRGAWRNEPNPDSCKEFFRCLAICHTVLPEGDESPEKIRYQAASPDEAALVIAAKNFGFFFYRRTPTSIYVRESHVEKMGKIQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADSVIYERLADGYRDIKKVTRDHLEQFGSAGLRTLCLAYKELPPDAYENWNEKFIQAKSSLRDREKKLDEVAELIENGLILIGCTAIEDKLQEGVPATIETLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFVISSETDVIREAEERGDLVEIARVTKEEVKKELKKCLEEAQSYLSSLSGPKLALVIDGKCLMYALDPSLRVTLLNLSLNCHAVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRYLADLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSMKYPELYMEGIKNVFFKWRVVAIWAFFSVYQSLILYYFVSTASLSAKNSAGLTFGVWDVSTMAFTCVVITVNLRLLMICNSITKWHTISVGGSILAWFIFAFIYCAILGKGNTYFAIFVLMSTIYFYLTIILVPVGALFGDFVYQGVQRWFFPYDYQIVQEMHRHEVEGTSRAQLLEIENQLTPAEARTYAISQLPREISKHTGFAFDSPGYESFFAAQLGVYAPQKAWDVARRASARSKPKILKKMIN 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1842 1232 Gene3D - 557 674 IPR023299 GO:0000166
Prci10g1842 1232 NCBIfam HAD-IC family P-type ATPase 835 941 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci10g1842 1232 FunFam Phospholipid-transporting ATPase 127 296 - -
Prci10g1842 1232 FunFam Phospholipid-transporting ATPase 539 694 - -
Prci10g1842 1232 Pfam Phospholipid-translocating P-type ATPase C-terminal 890 1136 IPR032630 -
Prci10g1842 1232 Coils Coil 770 797 - -
Prci10g1842 1232 MobiDBLite consensus disorder prediction 1 33 - -
Prci10g1842 1232 SUPERFAMILY Calcium ATPase, transduction domain A 149 292 IPR008250 -
Prci10g1842 1232 Pfam Cation transport ATPase (P-type) 528 622 - -
Prci10g1842 1232 CDD P-type_ATPase_APLT_Dnf-like 68 1022 - -
Prci10g1842 1232 SUPERFAMILY HAD-like 419 904 IPR036412 -
Prci10g1842 1232 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 438 701 IPR023299 GO:0000166
Prci10g1842 1232 SUPERFAMILY Calcium ATPase, transmembrane domain M 65 1136 IPR023298 -
Prci10g1842 1232 Pfam Phospholipid-translocating ATPase N-terminal 53 117 IPR032631 -
Prci10g1842 1232 FunFam Phospholipid-transporting ATPase IC 428 440 - -
Prci10g1842 1232 SFLD p-type atpase 413 913 IPR044492 -
Prci10g1842 1232 Pfam E1-E2 ATPase 151 387 - -
Prci10g1842 1232 Gene3D - 692 902 IPR023214 -
Prci10g1842 1232 ProSitePatterns E1-E2 ATPases phosphorylation site. 433 439 IPR018303 -
Prci10g1842 1232 Gene3D - 131 296 - -
Prci10g1842 1232 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Prci10g1842 1232 PRINTS P-type cation-transporting ATPase superfamily signature 431 445 - -
Prci10g1842 1232 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 46 1184 - -
Prci10g1842 1232 SFLD Haloacid Dehalogenase 413 913 - -
Prci10g1842 1232 NCBIfam phospholipid-translocating P-type ATPase 66 1144 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Prci10g1842 1232 FunFam Phospholipid-transporting ATPase 695 902 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1842 Prci-Chr10 15024413 15044936 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1842 7 1229 Primary Pumps ATPases AT1G59820 77.606 0.0 2027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1842 K14802 - gmx:100815547 2120.12