Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1841 ATGAGTGGATGGGACAGAGTTCGAGCATCATCGTCTTCTTCGGGATCGTCTCCTGGAATGGGTTCCAATCCCATGCGTAACCTCCCCAACCGCATACCTTCGAGTCGAACTGTTCAACTCGGCCGGGTCCAGCCCCAAGCCCCTGGCCACCGCACCGTTTTCTGCAACGATCGCGATGCGAATCTTCCCGTTCGATTCAAGGGGAATTCGATATCAACCACAAAATACAATCTTCTCACTTTCTTGCCGAAAGCTCTGTTTGAACAGTTCAGGCGGGTGGCTAATCTATACTTTCTTACAATTTCTATTTTGTCTACCACACCTATCAGTCCTGTATCTCCAATAACTAATGTGGCTCCTCTATCACTGGTGCTTCTTATCTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAGCGTTTTCAGAATGACTTGGCTGTAAACAATAATTTGATTGACGTTTTGCAAGACCAAAAGTGGGTTTCCATACCCTGGAAAAGGTTGCGAGTTGGAGATGTTGTCAGGGTTAAGCAGGATGGGTTCTTTCCTGCAGATCTGCTTTTTCTGGCTAGTACCAATCCTGATGGAGTCTGCTACATTGAGACTTCCAATTTGGATGGAGAAACCAATTTGAAGATTAGGAAAGCATTGGAAAAGACTTGGGATTACCAGACTCCAGAGAAGGCATCTGAGTTTAAAGGTGAAGTTCAGTGTGAACAGCCAAACAATTCATTGTATACCTTCACAGGGAATCTTATAATTCAAAAGCAAACACTGCCTCTCAGTCCAAACCAACTTTTGTTGCGAGGATGCAGTCTCAGGAATACAGAGTATATTGTTGGGGTTGTTATTTTTACCGGACATGAAACTAAGGTAATGATGAATACGATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGAAAACTTGACAAGCTCATACTTGCTCTATTTGTGACTCTTTTTGTGATGTGCTTACTTGGAGCCATTGGCAGTGGCATCTTCGTAAACAACAAGTATTTCTACTTACGTCTTAATGCAGGTGATGAGGGTTCTGGGCAGTTCAACCCAAGGAATAGAATTTTGGTTATTACTTTGACCATGTTTACCCTCATCACCTTGTACTCGACAATCATCCCCATTTCACTTTATGTGTCAATAGAGATGATCAAATTTATTCAGTGCACTCAGTTTATCGACAAAGATTTGCGCATGTACCACAGTGAGACCAACACCCCTGCATTGGCCAGAACTTCCAATCTAAATGAAGAACTTGGGCAGGTGGAATACATCTTCTCTGACAAAACCGGGACTCTAACAAGAAACTTAATGGAGTTCTTCAAGTGTTCAATTGGAGGGGAGATCTATGGAAATGGCATCACTGAAATTGAGAGAGGAATAGCTGAGCGCAATGGCATTAAACTTCAGGCAGAAAATGGATCAACCAATGCAGTGCAAGAAAAGGGTTTTAATTTTGATGATCCGAGGCTTATGCGTGGAGCATGGAGGAATGAGCCTAATCCTGATAGTTGCAAGGAATTCTTCAGATGCCTTGCTATATGCCATACTGTACTTCCTGAGGGAGATGAGTCCCCTGAAAAGATCAGATATCAAGCTGCATCACCTGATGAGGCTGCTTTGGTCATTGCTGCAAAGAACTTCGGTTTTTTCTTCTACAGGCGCACACCTACCTCAATATATGTTCGTGAATCTCATGTTGAGAAGATGGGTAAAATTCAGGATGTGTCTTATGAGATTTTGAATGTGCTTGAGTTTAACAGTACAAGGAAGCGTCAGTCTGTTGTATGTCGTTATCCAGATGGGAGACTTGTGTTGTATTGTAAGGGTGCTGATAGTGTAATCTATGAGAGATTGGCTGATGGTTATAGGGATATAAAGAAAGTGACTAGGGATCATTTGGAGCAATTTGGATCTGCTGGACTACGTACTTTATGCCTAGCCTACAAAGAACTGCCTCCTGATGCGTATGAAAACTGGAATGAAAAGTTCATCCAAGCCAAATCATCTCTTCGTGATCGTGAAAAGAAGTTAGATGAGGTGGCAGAGCTTATAGAAAATGGTCTTATTTTGATTGGTTGCACTGCCATAGAAGACAAGCTTCAAGAAGGAGTACCAGCTACAATAGAGACTCTTCAAAGGGCCGGCATTAAAATTTGGGTTCTTACAGGGGATAAGATTGAAACAGCCATAAATATTGCCTATGCATGCAATCTAATAAACAATGAGATGAAGCAATTTGTTATCAGTTCTGAAACTGATGTAATTAGAGAAGCTGAGGAAAGGGGTGACCTAGTGGAAATTGCACGTGTTACTAAGGAAGAAGTGAAAAAAGAACTGAAGAAGTGCCTTGAGGAAGCACAGAGCTACCTTTCATCGCTATCTGGACCCAAATTAGCACTTGTAATTGATGGAAAATGTCTAATGTATGCATTAGATCCTAGTTTAAGAGTGACGCTGCTGAACTTGAGTTTAAATTGTCATGCAGTTGTTTGCTGCCGAGTTTCTCCTTTACAGAAGGCACAGGTCACAAGTTTGGTAAAAAAAGGTGCACGGAAAATAACACTTAGTATTGGTGATGGAGCAAATGATGTCAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCATAAGTGGGTTGGAGGGGATGCAAGCAGTAATGGCTAGTGATTTTGCCATTGCACAGTTTCGGTACCTTGCAGATTTATTGCTTGTTCATGGCCGGTGGTCATATCTTCGAATATGCAAGGTGGTGACATACTTCTTTTACAAGAATCTCACATTCACTCTCACTCAGTTTTGGTTTACTTTTCAAACTGGATTTTCTGGTCAGAGGTTCTATGATGATTGGTTTCAGTCATTATATAATGTGATATTCACAGCGCTACCAGTGATCATTGTCGGACTATTTGACAAGGATGTCAGTGCATCTCTTTCCATGAAGTACCCTGAGCTGTACATGGAGGGGATAAAAAATGTCTTCTTCAAATGGAGAGTTGTGGCAATATGGGCCTTTTTTTCGGTTTACCAGTCTCTAATATTATACTATTTTGTTAGTACAGCAAGCTTAAGTGCTAAAAATTCAGCTGGCCTAACATTTGGAGTTTGGGATGTCAGTACAATGGCGTTCACATGTGTTGTAATAACAGTGAACTTGCGGCTTCTTATGATTTGTAATTCAATTACAAAGTGGCACACTATTAGCGTTGGTGGAAGTATATTAGCATGGTTTATTTTTGCTTTCATATATTGTGCCATCCTTGGAAAGGGGAATACTTATTTTGCCATATTTGTCTTGATGAGTACGATCTATTTCTACCTCACAATTATTTTAGTACCAGTGGGTGCACTTTTTGGTGACTTTGTTTATCAAGGGGTTCAAAGATGGTTCTTCCCTTATGACTATCAGATTGTTCAGGAAATGCATCGGCACGAAGTGGAGGGCACTAGCAGGGCACAGCTGCTGGAGATAGAGAACCAGCTAACACCAGCTGAGGCAAGAACTTATGCCATATCTCAACTCCCGCGTGAAATATCAAAGCATACAGGGTTTGCTTTTGATTCACCTGGGTATGAGTCCTTTTTTGCTGCACAGTTAGGTGTATATGCCCCACAAAAGGCATGGGATGTTGCGAGACGAGCTAGTGCCAGGTCAAAGCCCAAAATCTTAAAAAAAATGATAAATTGA 3702 0.4155 MSGWDRVRASSSSSGSSPGMGSNPMRNLPNRIPSSRTVQLGRVQPQAPGHRTVFCNDRDANLPVRFKGNSISTTKYNLLTFLPKALFEQFRRVANLYFLTISILSTTPISPVSPITNVAPLSLVLLISLIKEAFEDWKRFQNDLAVNNNLIDVLQDQKWVSIPWKRLRVGDVVRVKQDGFFPADLLFLASTNPDGVCYIETSNLDGETNLKIRKALEKTWDYQTPEKASEFKGEVQCEQPNNSLYTFTGNLIIQKQTLPLSPNQLLLRGCSLRNTEYIVGVVIFTGHETKVMMNTMNVPSKRSTLERKLDKLILALFVTLFVMCLLGAIGSGIFVNNKYFYLRLNAGDEGSGQFNPRNRILVITLTMFTLITLYSTIIPISLYVSIEMIKFIQCTQFIDKDLRMYHSETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGNGITEIERGIAERNGIKLQAENGSTNAVQEKGFNFDDPRLMRGAWRNEPNPDSCKEFFRCLAICHTVLPEGDESPEKIRYQAASPDEAALVIAAKNFGFFFYRRTPTSIYVRESHVEKMGKIQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADSVIYERLADGYRDIKKVTRDHLEQFGSAGLRTLCLAYKELPPDAYENWNEKFIQAKSSLRDREKKLDEVAELIENGLILIGCTAIEDKLQEGVPATIETLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFVISSETDVIREAEERGDLVEIARVTKEEVKKELKKCLEEAQSYLSSLSGPKLALVIDGKCLMYALDPSLRVTLLNLSLNCHAVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRYLADLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSMKYPELYMEGIKNVFFKWRVVAIWAFFSVYQSLILYYFVSTASLSAKNSAGLTFGVWDVSTMAFTCVVITVNLRLLMICNSITKWHTISVGGSILAWFIFAFIYCAILGKGNTYFAIFVLMSTIYFYLTIILVPVGALFGDFVYQGVQRWFFPYDYQIVQEMHRHEVEGTSRAQLLEIENQLTPAEARTYAISQLPREISKHTGFAFDSPGYESFFAAQLGVYAPQKAWDVARRASARSKPKILKKMIN 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1841 1233 FunFam Phospholipid-transporting ATPase 696 903 - -
Prci10g1841 1233 FunFam Phospholipid-transporting ATPase 127 296 - -
Prci10g1841 1233 NCBIfam phospholipid-translocating P-type ATPase 66 1145 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Prci10g1841 1233 Coils Coil 771 798 - -
Prci10g1841 1233 MobiDBLite consensus disorder prediction 1 33 - -
Prci10g1841 1233 SUPERFAMILY Calcium ATPase, transduction domain A 149 292 IPR008250 -
Prci10g1841 1233 Pfam Phospholipid-translocating P-type ATPase C-terminal 891 1137 IPR032630 -
Prci10g1841 1233 Gene3D - 131 296 - -
Prci10g1841 1233 NCBIfam HAD-IC family P-type ATPase 836 942 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci10g1841 1233 CDD P-type_ATPase_APLT_Dnf-like 68 1023 - -
Prci10g1841 1233 SFLD p-type atpase 413 914 IPR044492 -
Prci10g1841 1233 FunFam Phospholipid-transporting ATPase 540 695 - -
Prci10g1841 1233 PRINTS P-type cation-transporting ATPase superfamily signature 863 882 - -
Prci10g1841 1233 PRINTS P-type cation-transporting ATPase superfamily signature 431 445 - -
Prci10g1841 1233 Pfam Phospholipid-translocating ATPase N-terminal 53 117 IPR032631 -
Prci10g1841 1233 SUPERFAMILY Calcium ATPase, transmembrane domain M 65 1137 IPR023298 -
Prci10g1841 1233 SUPERFAMILY HAD-like 419 905 IPR036412 -
Prci10g1841 1233 SFLD C1.7: P-type atpase like 413 914 - -
Prci10g1841 1233 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 438 702 IPR023299 GO:0000166
Prci10g1841 1233 Pfam E1-E2 ATPase 151 387 - -
Prci10g1841 1233 Gene3D - 693 903 IPR023214 -
Prci10g1841 1233 ProSitePatterns E1-E2 ATPases phosphorylation site. 433 439 IPR018303 -
Prci10g1841 1233 Gene3D - 558 675 IPR023299 GO:0000166
Prci10g1841 1233 Pfam Cation transport ATPase (P-type) 529 623 - -
Prci10g1841 1233 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 46 1185 - -
Prci10g1841 1233 FunFam Phospholipid-transporting ATPase IC 428 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1841 Prci-Chr10 15024413 15044937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1841 7 1230 Primary Pumps ATPases AT1G59820 77.606 0.0 2031