Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1800 ATGTCTCGCACTTGCTCGCAGTGTGGCAACAACGGCCATAACTCCCGTACATGCATCCACGGCGGCGGCGGCGATGGTTCGTCTAAGGATAACGGGATTATGCTGTTTGGCGTGCGACTCACTCAAGGGAACTCGTTCAGGAAGAGTGCTAGTATGACGAATCTGTCGCAGTATGAAGCTCAGGCTCAGGATTCAAACGCCGTCGACGCTGGTTATGCCTCCGACGACGTCGTTCACGCTTCCGGACAGACGCGCGAGCGTAAGAGAGGTGTTCCCTGGACGGAGGAAGAGCACAGGCTATTCCTGTTGGGGTTACAGAAAGTCGGGAAAGGAGATTGGAGAGGGATTTCCAAGAACTTCGTCAAAACTCGGACGCCAACTCAGGTGGCGAGTCATGCTCAGAAGTACTTCCTTCGCCGCCACAACCAGAACCGAAGACGCCGGAGATCAAGTCTCTTTGACATTACCACCGATACAGTGATGGAACCCTCTTTAATGGAAGAAGAACAAATTCACCATGAAACGGCGATACCGCCCACACATCCACAGTTATACTACAGCGGCTTACCCAGTCCAACTTTTCCGACCAAGACGATGGCAGGAGAGAGATCAGCGAAGCCTATTAGGCCGATGCCAATCCTACCAGTCCCTCCGTCATCGAAAATGGCCACTCTAAATCTGAAAGAGAAGGTTCCAATAAGAGATCCCCTACCATTATCGCTGAAGCTGCCGACATCGCCGTCAACATCAAATGAGCAGTCGCAGGCAAGCAGCCAGTCATCGCCGTCGGATTTTCAGGCTATGTCTGACAAGTTCAGCGGCGGTGGAGATAGCATAATAAGCGTGGCTTGA 852 0.5258 MSRTCSQCGNNGHNSRTCIHGGGGDGSSKDNGIMLFGVRLTQGNSFRKSASMTNLSQYEAQAQDSNAVDAGYASDDVVHASGQTRERKRGVPWTEEEHRLFLLGLQKVGKGDWRGISKNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTDTVMEPSLMEEEQIHHETAIPPTHPQLYYSGLPSPTFPTKTMAGERSAKPIRPMPILPVPPSSKMATLNLKEKVPIRDPLPLSLKLPTSPSTSNEQSQASSQSSPSDFQAMSDKFSGGGDSIISVA 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1800 283 MobiDBLite consensus disorder prediction 242 268 - -
Prci10g1800 283 PANTHER TRANSCRIPTION FACTOR KUA1 1 248 - -
Prci10g1800 283 ProSiteProfiles SANT domain profile. 88 141 IPR017884 -
Prci10g1800 283 MobiDBLite consensus disorder prediction 230 283 - -
Prci10g1800 283 SMART sant 89 139 IPR001005 -
Prci10g1800 283 Gene3D - 91 142 - -
Prci10g1800 283 FunFam transcription factor MYB1R1 91 142 - -
Prci10g1800 283 Pfam Myb-like DNA-binding domain 92 137 IPR001005 -
Prci10g1800 283 ProSiteProfiles Myb-like domain profile. 85 137 IPR001005 -
Prci10g1800 283 SUPERFAMILY Homeodomain-like 87 140 IPR009057 -
Prci10g1800 283 NCBIfam myb-like DNA-binding domain, SHAQKYF class 88 139 IPR006447 GO:0003677
Prci10g1800 283 MobiDBLite consensus disorder prediction 197 217 - -
Prci10g1800 283 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 141 IPR017930 -
Prci10g1800 283 CDD SANT 92 137 IPR001005 -
Prci10g1800 283 ProSiteProfiles Zinc finger CCHC-type profile. 5 18 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1800 Prci-Chr10 14404449 14406101 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci10g1800 Myb_DNA-binding 3.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1800 - - qsa:O6P43_025371 327.791