Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1799 ATGTCTCGCACTTGCTCGCAGTGTGGCAACAACGGCCATAACTCCCGTACATGCATCCACGGCGGCGGCGGCGATGGTTCGTCTAAGGATAACGGGATTATGCTGTTTGGCGTGCGACTCACTCAAGGGAACTCGTTCAGGAAGAGTGCTAGTATGACGAATCTGTCGCAGTATGAAGCTCAGGCTCAGGATTCAAACGCCGTCGACGCTGGTTATGCCTCCGACGACGTCGTTCACGCTTCCGGACAGACGCGCGAGCGTAAGAGAGGTGTTCCCTGGACGGAGGAAGAGCACAGGCTATTCCTGTTGGGGTTACAGAAAGTCGGGAAAGGAGATTGGAGAGGGATTTCCAAGAACTTCGTCAAAACTCGGACGCCAACTCAGGTGGCGAGTCATGCTCAGAAGTACTTCCTTCGCCGCCACAACCAGAACCGAAGACGCCGGAGATCAAGTCTCTTTGACATTACCACCGATACAGTAGTGATGGAACCCTCTTTAATGGAAGAAGAACAAATTCACCATGAAACGGCGATACCGCCCACACATCCACAGTTATACTACAGCGGCTTACCCAGTCCAACTTTTCCGACCAAGACGATGGCAGGAGAGAGATCAGCGAAGCCTATTAGGCCGATGCCAATCCTACCAGTCCCTCCGTCATCGAAAATGGCCACTCTAAATCTGAAAGAGAAGGTTCCAATAAGAGATCCCCTACCATTATCGCTGAAGCTGCCGACATCGCCGTCAACATCAAATGAGCAGTCGCAGGCAAGCAGCCAGTCATCGCCGTCGGATTTTCAGGCTATGTCTGACAAGTTCAGCGGCGGTGGAGATAGCATAATAAGCGTGGCTTGA 855 0.5251 MSRTCSQCGNNGHNSRTCIHGGGGDGSSKDNGIMLFGVRLTQGNSFRKSASMTNLSQYEAQAQDSNAVDAGYASDDVVHASGQTRERKRGVPWTEEEHRLFLLGLQKVGKGDWRGISKNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTDTVVMEPSLMEEEQIHHETAIPPTHPQLYYSGLPSPTFPTKTMAGERSAKPIRPMPILPVPPSSKMATLNLKEKVPIRDPLPLSLKLPTSPSTSNEQSQASSQSSPSDFQAMSDKFSGGGDSIISVA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1799 284 ProSiteProfiles SANT domain profile. 88 141 IPR017884 -
Prci10g1799 284 SMART sant 89 139 IPR001005 -
Prci10g1799 284 Gene3D - 91 142 - -
Prci10g1799 284 Pfam Myb-like DNA-binding domain 92 137 IPR001005 -
Prci10g1799 284 MobiDBLite consensus disorder prediction 198 218 - -
Prci10g1799 284 ProSiteProfiles Myb-like domain profile. 85 137 IPR001005 -
Prci10g1799 284 SUPERFAMILY Homeodomain-like 87 140 IPR009057 -
Prci10g1799 284 FunFam transcription factor MYB1R1 91 142 - -
Prci10g1799 284 NCBIfam myb-like DNA-binding domain, SHAQKYF class 88 139 IPR006447 GO:0003677
Prci10g1799 284 MobiDBLite consensus disorder prediction 243 269 - -
Prci10g1799 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 141 IPR017930 -
Prci10g1799 284 PANTHER TRANSCRIPTION FACTOR KUA1 1 249 - -
Prci10g1799 284 CDD SANT 92 137 IPR001005 -
Prci10g1799 284 ProSiteProfiles Zinc finger CCHC-type profile. 5 18 IPR001878 GO:0003676|GO:0008270
Prci10g1799 284 MobiDBLite consensus disorder prediction 231 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1799 Prci-Chr10 14404449 14406102 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci10g1799 Myb_DNA-binding 3.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1799 - - qsa:O6P43_025371 329.331