Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1797 ATGACGAAGTTGTACTGCAAGAAATACAATGAGTACATGCAAAGCCAGCAGGAGAAGAAGCTTCCTGAAGTTGATATCAATAAGCTCAAGACTATCTTGAAAACATGTCGCAGAGATTGTCCTTGCCGGAAAGGCATCACCGGAGGAGGAGAAGAAGAAGAAGAAGCCCTTGCAGTTCCAAAGTGCACCGATCGTTGCCCAGTGTGTGATGGAAGCTCCTTCTTTCCTTCTCTTCTCAATGGGATGAGTGAAGTAGTGGCTTACTTTAACGATCGAGCCCGGAAATTGATTGAGCTTCATCGTGCTTCTAGCTTCAAGAAGTACTTTCTATCCTTCAAAACCAAATTACGTGGACAACAACATATTGACCACATTCAAGAAGGCAAAGATCTTGTTACTTACGCTCTAATCACTTCCACTGTAATTCACAAGATACTCGAAAAATACGATAAGATTCATTATTCGAAGCAAGGGCAATTATTCAAGTCAAGAGCCCAGAGTATGCACGTGGAAATTCTTCGGAGTCCCTGGCTTTTAGAACTCATGGCCTTCCACATCAATTTAAGGGAAGCCAAGAGCGAATCAATGAACAAGGAATCTCATAATTCCTTTGATGGATACTACCTCACATTTAGGGATAATAAACCATCGCTTACTTTTGAGCACTTTGATTCCACCAAACTTGATATTGAATTGACTTGTTCTATATGCTTGGACACTGTTTTTGATCCGGTTTGTCTAACTTGTGGCCATATCTTCTGCTACACGTGCGCTTGTTCATCTGCATCAGTAGCTATTGTTGATGGGCTCAAGGCATCCAACTCTGCAGCAAAGTGTCCCCTATGCCGGGTGGACATAACAGGATGGAGACTTGGAAATCTAATTTTAAGAGCGCATCTCTGTAACCATAACTCAAACAATACAAGTTGTAGCCTGGGAAAACCTTCTTGGGACCTACTCAAAAGATAA 969 0.42 MTKLYCKKYNEYMQSQQEKKLPEVDINKLKTILKTCRRDCPCRKGITGGGEEEEEALAVPKCTDRCPVCDGSSFFPSLLNGMSEVVAYFNDRARKLIELHRASSFKKYFLSFKTKLRGQQHIDHIQEGKDLVTYALITSTVIHKILEKYDKIHYSKQGQLFKSRAQSMHVEILRSPWLLELMAFHINLREAKSESMNKESHNSFDGYYLTFRDNKPSLTFEHFDSTKLDIELTCSICLDTVFDPVCLTCGHIFCYTCACSSASVAIVDGLKASNSAAKCPLCRVDITGWRLGNLILRAHLCNHNSNNTSCSLGKPSWDLLKR 322
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1797 322 SUPERFAMILY RING/U-box 227 286 - -
Prci10g1797 322 ProSitePatterns Zinc finger RING-type signature. 249 258 IPR017907 -
Prci10g1797 322 ProSiteProfiles Zinc finger RING-type profile. 234 283 IPR001841 -
Prci10g1797 322 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 183 308 IPR013083 -
Prci10g1797 322 SMART ring_2 234 282 IPR001841 -
Prci10g1797 322 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 6 284 IPR033326 -
Prci10g1797 322 Pfam Zinc finger, C3HC4 type (RING finger) 232 287 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci10g1797 Prci-Chr10 14324087 14328731 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1797 224 319 C3H Transcription Factor Family AT4G28270 32.039 1.67e-10 57.8