Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1793 ATGCCATTTGGGTTTGTCTCAGCTTGGAACAAGAGACGTAGAACCAAGTTTCAGGATCACACAGACCCTTGGATATATAAGCCTGTGGAGTTCTGGCAGATTGAAGATCAAGCACCTCGGCCAACAAAGAGGAGGCATGGATCATCTGTGTTCACACTCAGAGAGATGGAAGAGGCAACATGTTCATTCAGTGATGATAATTTGCTTGGAAAAGGAGGATTTGGCAAAGTCTACAGGGGCACTTTGCGTTCAGGAGAGGTTGTAGCGATCAAGAAAATGGAGCTGCCAGCATTCAAAGAAGCAGAAGGAGAGAGAGAGTTCAGAGTGGAAGTGGACATATTGAGCAGACTGGACCATCCAAATCTTGTTTCCTTGATAGGCTATTGTGCTGATGGAAAGCACAGATTCCTGGTTTATGAGTATATGCATAATGGCAACCTCCAAGATCATTTAAATGGCATCACAGAGAGAAAAATGGATTGGCCTCAACGGCTGAAGGTGGCACTGGGAGCTGCAAGAGGGCTTGCATATCTCCATTCAAGTGGAGCCGTTGGGATTCCTATTGTGCACAGAGATTTTAAATCCACCAATGTTCTCTTAAATGCTAACTTTGAAGCTAAGATTTCGGATTTTGGGCTGGCCAAGTTAATGCCTGAAGGGCAAGAGACTCATGTCACAGCTAGAGTACTTGGTACCTTTGGCTATTTTGATCCTGAGTATACATCGACAGGGAAACTTACTTTGCAAAGCGATGTTTATGCATTTGGTGTGGTTCTCCTTGAGCTCCTAACTGGACGCCGAGCTGTAGATCTTAACCTGGGTCCAAACGATCAAAACCTCGTATTGCAGGTACAGATTACAAATGAGTGA 870 0.4471 MPFGFVSAWNKRRRTKFQDHTDPWIYKPVEFWQIEDQAPRPTKRRHGSSVFTLREMEEATCSFSDDNLLGKGGFGKVYRGTLRSGEVVAIKKMELPAFKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMHNGNLQDHLNGITERKMDWPQRLKVALGAARGLAYLHSSGAVGIPIVHRDFKSTNVLLNANFEAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNLGPNDQNLVLQVQITNE 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1793 289 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Prci10g1793 289 SUPERFAMILY Protein kinase-like (PK-like) 49 278 IPR011009 -
Prci10g1793 289 FunFam Os07g0541700 protein 142 232 - -
Prci10g1793 289 FunFam serine/threonine-protein kinase PBS1-like 32 141 - -
Prci10g1793 289 Gene3D Transferase(Phosphotransferase) domain 1 142 288 - -
Prci10g1793 289 CDD STKc_IRAK 69 282 - -
Prci10g1793 289 Pfam Protein kinase domain 64 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1793 289 PANTHER OS01G0750732 PROTEIN 43 282 - -
Prci10g1793 289 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Prci10g1793 289 ProSiteProfiles Protein kinase domain profile. 63 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1793 289 Gene3D Phosphorylase Kinase; domain 1 33 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1793 Prci-Chr10 14260934 14263922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1793 47 285 Glycoside Hydrolase AT3G07070 50.826 4.40e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Prci10g1793 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1793 - - tcc:18609435 529.25