Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1787 ATGTCGGTTTCCTGCTCCGATAGCTACTTCCGCGACTCTGACCTTCTTTGCTGCGAGGGTACATCTGGAATCTTGTCCGGAGAGTCGCCGGAATGCTCTTCCGACCTTGATTCCTCGCCATCGCCAGTATTGCTGGAGGAGTCGATAGCCGAATTCATCGAAGAGGAGCGCAACTTCGTCCCTGGATTTGACTACTTCTCCAGATTTCAATCTCACTCGCCCGACGCCTCCGCCAGAGAAGAATCCGTTGCATGGATTCTCAAGGTGCAAGCATACTATGGCTTTCAGCCGTTGACTGTGTATCTTGCCGTCAACTATTTGGACCGGTTTTTGGATTCTCGGCAGTTGCCTCTAACGGATGGGTGGCCGATGCAACTTTTATCTGTTGCTTGTTTGTCATTAGCTGCAAAAATGGAGGAACCTTTAGTTCCGTCCCTTTTGGGTTTTCAGGTAGAAGGTGCCAAATATATATTTGAGCCAAGAACAATTCGTCGGATGGAACTACTTGTTCTGAGTGTTTTGGATTGGAGGCTACGATCAATCACACCATTCAGTTTCATCGATTTCTTTGCTTGCAAACTCGATCCAACGGGAACTTTTACTGGCTTGCTCATCTCGCGGGCTACAGAAATAATCTTATCTAATATCCAAGAGGCTAGCTTTCTTGCCTATCGGCCATCATGTATTGCTGTCGCGGCCATACTTTGTGCTGCTAATGAAATTCCTAATTGGTCTCTTGTTAAGCCTGAGCATGCTGAGTCATGGTGTGAGGGACTGATAAAAGAGAAAATCACAGGTTGCTACCAGTTGATCCAAGAACTTGTGATTGACAATAACAGGAGGAAGGTCCCTAAAGTCTTACCACAGTTGCGAGTAACGATTCAACCCAGAGTGAGTTCCAGTATTTTATCATTGTCTGCTTCATCGTCTTCCTCCTCTTCCTCGTCGCCTTGTAAAAGGAGGAAAATAAATAACTGCTTGTGGGTGGATGATGACAAAGGAAACTCCCAGTGA 1014 0.4635 MSVSCSDSYFRDSDLLCCEGTSGILSGESPECSSDLDSSPSPVLLEESIAEFIEEERNFVPGFDYFSRFQSHSPDASAREESVAWILKVQAYYGFQPLTVYLAVNYLDRFLDSRQLPLTDGWPMQLLSVACLSLAAKMEEPLVPSLLGFQVEGAKYIFEPRTIRRMELLVLSVLDWRLRSITPFSFIDFFACKLDPTGTFTGLLISRATEIILSNIQEASFLAYRPSCIAVAAILCAANEIPNWSLVKPEHAESWCEGLIKEKITGCYQLIQELVIDNNRRKVPKVLPQLRVTIQPRVSSSILSLSASSSSSSSSSPCKRRKINNCLWVDDDKGNSQ 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1787 337 SMART cyclin_7 84 172 IPR013763 -
Prci10g1787 337 CDD CYCLIN_AtCycD-like_rpt2 181 271 - -
Prci10g1787 337 FunFam D2/4-type cyclin 62 179 - -
Prci10g1787 337 Pfam Cyclin, C-terminal domain 181 288 IPR004367 -
Prci10g1787 337 ProSitePatterns Cyclins signature. 79 110 IPR006671 -
Prci10g1787 337 SMART Cyclin_C_2 181 312 IPR004367 -
Prci10g1787 337 PANTHER CYCLINS 49 277 IPR039361 -
Prci10g1787 337 Gene3D - 62 179 - -
Prci10g1787 337 CDD CYCLIN_AtCycD-like_rpt1 78 176 - -
Prci10g1787 337 Gene3D - 52 242 - -
Prci10g1787 337 SUPERFAMILY Cyclin-like 45 178 IPR036915 -
Prci10g1787 337 Pfam Cyclin, N-terminal domain 49 178 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1787 Prci-Chr10 14169580 14173226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1787 1 337 Core Cell Cycle Gene Families AT1G70210 63.636 1.03e-139 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1787 K18810 - gmx:100775224 481.87