Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1775 ATGCCGGCGCATAGATCGAAATCGGAGAAGCATGATGCTGCGAAGCAGCCTCGTCGAGATCCCTACGAGGTACTCGGCGTCTCACGTAACTCGACAGATCAGGAAATCAAAACAGCTTACCGAAAAATGGCGCTCAAATGTCATCCTGACAAGAATGCTAATGATCCTAAAGCAGCCGATATGTTTAAAGAGGTCACCTTTTCATACAATATCTTGTCAGATCCTGACAAACGGCGTCAGTATGACTCATCTGGATTTGAGGCCATTGAATCAGATAGCCAAGAATTGGAGTTGGATCTTTCAAGTTTGGGTGCTGTGAATACAATGTTTGCTGCGCTTTTTAGTAAACTTGGTGTGCCAATTAAGACAACTGTATCAGCAACTGTTTTGGAAGAGGCACTTAATGGTGTGGTGACCATTCGTCCACTTCCCTTGGGGCATCCTATATGTAGAAGGGTTGAAAAGCAATGTGCTCACTTCTATTCAGTTACAATAACAGAAGAGGAAGCACGGGCTGGTTTTGTTTGTCGGGTGCAATCATCTGACAAAAGCAAATTTAAGTTATTATATTTTGACCAAGAAGAGAATGGTGGATTGAGTCTTGCACTCCAGGAAGATAGTGCTAAAACAGGAAAGGTTACCTCTGCTGGAATGTATTTTCTTGGTTTTCCTGTTTATCGGCTTGATCAAACAGCAAATTCAATAGCTGCTGCTAAGGATCCTGATACATCATTTTTCAGAAAGCTGGATGGGTTCCAACCATGTGAATTAACAGAATTGAAGGCTGGCACCCATGTTTTTGCTGTTTATGGTGACAATTTCTTCAAAAGTGCAAGCTATACAATAGAAGCTCTCTGTGCTTCACCTTTTAGTCAAGAAAAAGAGAGCCTCAGGAACATAGAAGCTCAAATCTTATCTAAACGGGCAGAACTATCTAAATTTGAGAGTGAATATCGAGAGGTTCTAGCACAATTTACAGAGATGACAAACAGGTATGCTCAAGAAATGCAAGTGATTGATGAGCTACTGAAGCAAAGAAATGAGATACATGCATCATATACCATTTTTCCACTAAAACGTAGTACAAGTAAGAGTAGGAGTAAAAGTTCTTCCAAGGAGGCGACGGAAGAGAGCCAACCAAGAGAGAGGAGATTTACAAGAGGCCGATCAAAGAAGAAATGGTATAACATCCACTTAAGAGTTGACAAGAGAAAGGCTTGCTGA 1224 0.4134 MPAHRSKSEKHDAAKQPRRDPYEVLGVSRNSTDQEIKTAYRKMALKCHPDKNANDPKAADMFKEVTFSYNILSDPDKRRQYDSSGFEAIESDSQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGVVTIRPLPLGHPICRRVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDQEENGGLSLALQEDSAKTGKVTSAGMYFLGFPVYRLDQTANSIAAAKDPDTSFFRKLDGFQPCELTELKAGTHVFAVYGDNFFKSASYTIEALCASPFSQEKESLRNIEAQILSKRAELSKFESEYREVLAQFTEMTNRYAQEMQVIDELLKQRNEIHASYTIFPLKRSTSKSRSKSSSKEATEESQPRERRFTRGRSKKKWYNIHLRVDKRKAC 407
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1775 407 MobiDBLite consensus disorder prediction 366 384 - -
Prci10g1775 407 Gene3D DnaJ domain 4 103 IPR036869 -
Prci10g1775 407 ProSiteProfiles dnaJ domain profile. 20 85 IPR001623 -
Prci10g1775 407 MobiDBLite consensus disorder prediction 1 19 - -
Prci10g1775 407 FunFam Chaperone protein dnaJ 16 4 102 - -
Prci10g1775 407 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 5 406 - -
Prci10g1775 407 CDD DnaJ 20 74 IPR001623 -
Prci10g1775 407 SMART dnaj_3 19 77 IPR001623 -
Prci10g1775 407 Coils Coil 297 317 - -
Prci10g1775 407 MobiDBLite consensus disorder prediction 360 390 - -
Prci10g1775 407 MobiDBLite consensus disorder prediction 1 28 - -
Prci10g1775 407 ProSitePatterns Nt-dnaJ domain signature. 62 81 IPR018253 -
Prci10g1775 407 PRINTS DnaJ domain signature 77 96 IPR001623 -
Prci10g1775 407 PRINTS DnaJ domain signature 57 77 IPR001623 -
Prci10g1775 407 PRINTS DnaJ domain signature 22 40 IPR001623 -
Prci10g1775 407 PRINTS DnaJ domain signature 40 55 IPR001623 -
Prci10g1775 407 Pfam DnaJ domain 20 82 IPR001623 -
Prci10g1775 407 SUPERFAMILY Chaperone J-domain 17 88 IPR036869 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci10g1775 Prci-Chr10 13961397 13965476 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1775 13 83 C2H2 Transcription Factor Family AT1G74250 39.474 7.31e-11 62.0
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1775 - - gmx:100800929 696.041
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1775 10 13961397 13965476 Prci10g1775 10 13961397 13965476 ECH