Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci10g1775 | ATGCCGGCGCATAGATCGAAATCGGAGAAGCATGATGCTGCGAAGCAGCCTCGTCGAGATCCCTACGAGGTACTCGGCGTCTCACGTAACTCGACAGATCAGGAAATCAAAACAGCTTACCGAAAAATGGCGCTCAAATGTCATCCTGACAAGAATGCTAATGATCCTAAAGCAGCCGATATGTTTAAAGAGGTCACCTTTTCATACAATATCTTGTCAGATCCTGACAAACGGCGTCAGTATGACTCATCTGGATTTGAGGCCATTGAATCAGATAGCCAAGAATTGGAGTTGGATCTTTCAAGTTTGGGTGCTGTGAATACAATGTTTGCTGCGCTTTTTAGTAAACTTGGTGTGCCAATTAAGACAACTGTATCAGCAACTGTTTTGGAAGAGGCACTTAATGGTGTGGTGACCATTCGTCCACTTCCCTTGGGGCATCCTATATGTAGAAGGGTTGAAAAGCAATGTGCTCACTTCTATTCAGTTACAATAACAGAAGAGGAAGCACGGGCTGGTTTTGTTTGTCGGGTGCAATCATCTGACAAAAGCAAATTTAAGTTATTATATTTTGACCAAGAAGAGAATGGTGGATTGAGTCTTGCACTCCAGGAAGATAGTGCTAAAACAGGAAAGGTTACCTCTGCTGGAATGTATTTTCTTGGTTTTCCTGTTTATCGGCTTGATCAAACAGCAAATTCAATAGCTGCTGCTAAGGATCCTGATACATCATTTTTCAGAAAGCTGGATGGGTTCCAACCATGTGAATTAACAGAATTGAAGGCTGGCACCCATGTTTTTGCTGTTTATGGTGACAATTTCTTCAAAAGTGCAAGCTATACAATAGAAGCTCTCTGTGCTTCACCTTTTAGTCAAGAAAAAGAGAGCCTCAGGAACATAGAAGCTCAAATCTTATCTAAACGGGCAGAACTATCTAAATTTGAGAGTGAATATCGAGAGGTTCTAGCACAATTTACAGAGATGACAAACAGGTATGCTCAAGAAATGCAAGTGATTGATGAGCTACTGAAGCAAAGAAATGAGATACATGCATCATATACCATTTTTCCACTAAAACGTAGTACAAGTAAGAGTAGGAGTAAAAGTTCTTCCAAGGAGGCGACGGAAGAGAGCCAACCAAGAGAGAGGAGATTTACAAGAGGCCGATCAAAGAAGAAATGGTATAACATCCACTTAAGAGTTGACAAGAGAAAGGCTTGCTGA | 1224 | 0.4134 | MPAHRSKSEKHDAAKQPRRDPYEVLGVSRNSTDQEIKTAYRKMALKCHPDKNANDPKAADMFKEVTFSYNILSDPDKRRQYDSSGFEAIESDSQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGVVTIRPLPLGHPICRRVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDQEENGGLSLALQEDSAKTGKVTSAGMYFLGFPVYRLDQTANSIAAAKDPDTSFFRKLDGFQPCELTELKAGTHVFAVYGDNFFKSASYTIEALCASPFSQEKESLRNIEAQILSKRAELSKFESEYREVLAQFTEMTNRYAQEMQVIDELLKQRNEIHASYTIFPLKRSTSKSRSKSSSKEATEESQPRERRFTRGRSKKKWYNIHLRVDKRKAC | 407 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci10g1775 | 407 | MobiDBLite | consensus disorder prediction | 366 | 384 | - | - | |
Prci10g1775 | 407 | Gene3D | DnaJ domain | 4 | 103 | IPR036869 | - | |
Prci10g1775 | 407 | ProSiteProfiles | dnaJ domain profile. | 20 | 85 | IPR001623 | - | |
Prci10g1775 | 407 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
Prci10g1775 | 407 | FunFam | Chaperone protein dnaJ 16 | 4 | 102 | - | - | |
Prci10g1775 | 407 | PANTHER | DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) | 5 | 406 | - | - | |
Prci10g1775 | 407 | CDD | DnaJ | 20 | 74 | IPR001623 | - | |
Prci10g1775 | 407 | SMART | dnaj_3 | 19 | 77 | IPR001623 | - | |
Prci10g1775 | 407 | Coils | Coil | 297 | 317 | - | - | |
Prci10g1775 | 407 | MobiDBLite | consensus disorder prediction | 360 | 390 | - | - | |
Prci10g1775 | 407 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Prci10g1775 | 407 | ProSitePatterns | Nt-dnaJ domain signature. | 62 | 81 | IPR018253 | - | |
Prci10g1775 | 407 | PRINTS | DnaJ domain signature | 77 | 96 | IPR001623 | - | |
Prci10g1775 | 407 | PRINTS | DnaJ domain signature | 57 | 77 | IPR001623 | - | |
Prci10g1775 | 407 | PRINTS | DnaJ domain signature | 22 | 40 | IPR001623 | - | |
Prci10g1775 | 407 | PRINTS | DnaJ domain signature | 40 | 55 | IPR001623 | - | |
Prci10g1775 | 407 | Pfam | DnaJ domain | 20 | 82 | IPR001623 | - | |
Prci10g1775 | 407 | SUPERFAMILY | Chaperone J-domain | 17 | 88 | IPR036869 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci10g1775 | Prci-Chr10 | 13961397 | 13965476 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci10g1775 | 13 | 83 | C2H2 Transcription Factor Family | AT1G74250 | 39.474 | 7.31e-11 | 62.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci10g1775 | - | - | gmx:100800929 | 696.041 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Prci10g1775 | 10 | 13961397 | 13965476 | Prci10g1775 | 10 | 13961397 | 13965476 | ECH |