Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1756 ATGGCATCAAGATCATTTGCTAATCTCATAGACTTAGTTAGTGGAGGCTTATTGGATGTTCCCTACACACCAAGAGCTCTTCCAAGAGTTGTGACAGTTCCTGGAATCATTTCTGACCTGGATGGCCATGGTAATAATGATGTGGATTCTGATGCTAGCTCATCTGGGTGTCAGGAGCGGAAAATTATAGTGGCAAACATGCTGCCATTGCAGGCTAAAAGAGATGCAGAATCTGCTAAATGGTGTTTCAGCATGGATGAGGATTCAATTTTATTACAATTGAAAGATGGTTTTTCTTCTGATACTGAGGTTATCTATGTGGGTTCTTTGAAGGTTGAGATAGATGCCAGTGAGCAGGAAGAAGTTGCTCAGAAACTACTGGAGGATTTCAGTTGCGTACCTACCTTTTTACCACATGAAATCCAGAAGAGGTTTTATCTTGGCTTTTGTAAGCAGCAGCTTTGGCCCCTTTTTCATTACATGCTACCTATGTGCCCAGATCATGGTGACCGCTTTGATCGCATGCTTTGGCAGGCTTATGTTTCTGCAAACAAAATATTTGCAGACAAGGTTATGGAAATAATTAATCCTGATGATGATTTTGTGTGGGTTCATGACTATCACTTGATGGTTTTGCCTACATTTCTTAGGAAGCGATTTAATCGAGTTAAACTCGGATTCTTCCTTCATAGTCCTTTCCCTTCATCTGAAATTTACAGAACTCTGCCAGTACGAGATGAAATTCTGAGGGGACTGTTGAATTCTGACTTAATTGGTTTTCATACATTTGATTATGCTCGCCACTTCCTCTCTTGCTGCAGCAGAATGCTGGGTCTGGACTATGAATCTAAGCGGGGACATATAGGACTTGATTACTTTGGCCGCACTGTATATATTAAAATTTTGCCCGTGGGCATTCACATGGGCAGGCTTGAATCTGTATTAAATCTTCCTTCTACATCTGCTAAAATAAAAGAGATTCAGGAAGAGTTTAAGGGCAGGAAGCTGATTCTTGGTGTTGATGATATGGATATCTTTAAGGGCATCAATTTAAAACTTCTAGCTTTGGAGCAGCTGCTGCAGCAAAACCCAGACTTACTGGGAGAGGTGGTCCTAGTTCAAATTTTAAACCCTGCAAGGGGTTCAGGGAAGGATGTTCAAGAAGCAAAGAAGGAAACAAATTTAATTGCCCAAAGGATCAATGATACATATGGCTCAAAACATTATCGACCAGTTATTCTCATCGATCGTCCAGTTCCTCGTTTTGAAAAGAGTGCTTATTATGCTGTGGCAGAGTGTTGCATTGTTAATGCTGTGAGGGACGGTATGAACTTAGTCCCATACAAATATGTTGTCTGCAGACAAGGGACTACTCAACTGGACAAAGCATTGGGTAGAAAAAGTGATTCCCCTCGCACAAGCATGCTTGTGGTCTCTGAGTTCATTGGTTGCTCCCCTTCTCTAAGTGGAGCAATTAAGGTCAATCCTTGGGATATTGATGCAGTTGCTGATGCAATGTATGTGGCCATTACAACCTGTTATTCAGAGAAGGAATTGAGGCATGAGAAACACTATCGATATGTCAGTTCTCATGATGTGGCTTATTGGGCCCGCAGCTTCTTGCAGGATTTGGAGAGGGCATGTGTAGATCATTATACCAAAAGGTGCTGGGGAATTGGTTTGGGCCTAGGGTTCAGAGTTCTTTCTCTTTCTCCTGGTTTTAGGAGGTTGTCCATCGATCATGTTGTTTCAGCTTATAAAAGAACTAATAGAAGGGCCATATTTCTTGATTATGATGGTACAATTGTACCGCACTCTTCTATAAATAAAATCCCCAGCTCTGAAGTCATATCTGTGCTGAATACTCTGTGTAATGATGCCAAGAACAGTGTGTTCATTGTTAGTGGAAGGGGAAGAGATTCTCTTAGTGAGTGGTTTGCTTCATGCAAGAGGCTGGGACTTGCGGCTGAACATGGGTACTTTTTAAGGTGGATTGGAGACTCAGAATGGGAAACCAATCACTTGTCTGCTGATCTTGAATGGAAAAATATAGTGGAACCTGTCATGACATCATATACAGAAGCAACTGATGGGTCTAATATTGAAATTAAGGAAAGTGCTTTGGTGTGGCACCATCAAGATGCAGACCCTGATTTTGGTTCTTGCCAAGCTAAAGAATTGTTGAATCACCTGGAAAGTGTGCTTTCTAATGAACCAGCTGTCGTTACAAGGGGTCATCATATTGTTGAAGTCAAGCCACAGGGAATAAGCAAGGGTTTAGTAGCAGAAAAGGTTCTCTCGACCCTGTTAGATGATGGGAATCTGCCGGATTTTGTGATGTGCATTGGAGATGACAGGTCGGATGAAGACATGTTTGAGAGCATATCAAGGACAGCCTGTAGTCCTTCATCGCCAGTTGCTCCAGAGGTCTTTGCTTGCACTGTTGGTAGCAAGCCTAGCAAGGCCAAGTATTATCTTGATGATACTGCTGATGTTGTAAAATTGCTTAAAGGCCTTGCAGCTGCATCAAATCCAAAGCCAAGGCATCCACCCCAGTTCAAGGTTTCTTTTGAAAGCACAGCATGA 2586 0.4211 MASRSFANLIDLVSGGLLDVPYTPRALPRVVTVPGIISDLDGHGNNDVDSDASSSGCQERKIIVANMLPLQAKRDAESAKWCFSMDEDSILLQLKDGFSSDTEVIYVGSLKVEIDASEQEEVAQKLLEDFSCVPTFLPHEIQKRFYLGFCKQQLWPLFHYMLPMCPDHGDRFDRMLWQAYVSANKIFADKVMEIINPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGIHMGRLESVLNLPSTSAKIKEIQEEFKGRKLILGVDDMDIFKGINLKLLALEQLLQQNPDLLGEVVLVQILNPARGSGKDVQEAKKETNLIAQRINDTYGSKHYRPVILIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYVVCRQGTTQLDKALGRKSDSPRTSMLVVSEFIGCSPSLSGAIKVNPWDIDAVADAMYVAITTCYSEKELRHEKHYRYVSSHDVAYWARSFLQDLERACVDHYTKRCWGIGLGLGFRVLSLSPGFRRLSIDHVVSAYKRTNRRAIFLDYDGTIVPHSSINKIPSSEVISVLNTLCNDAKNSVFIVSGRGRDSLSEWFASCKRLGLAAEHGYFLRWIGDSEWETNHLSADLEWKNIVEPVMTSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLNHLESVLSNEPAVVTRGHHIVEVKPQGISKGLVAEKVLSTLLDDGNLPDFVMCIGDDRSDEDMFESISRTACSPSSPVAPEVFACTVGSKPSKAKYYLDDTADVVKLLKGLAAASNPKPRHPPQFKVSFESTA 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1756 861 CDD GT20_TPS 60 545 IPR001830 GO:0003824|GO:0005992
Prci10g1756 861 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 841 IPR001830 GO:0003824|GO:0005992
Prci10g1756 861 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 721 852 - -
Prci10g1756 861 SUPERFAMILY HAD-like 592 840 IPR036412 -
Prci10g1756 861 NCBIfam HAD-IIB family hydrolase 593 794 IPR006379 -
Prci10g1756 861 FunFam Alpha,alpha-trehalose-phosphate synthase 314 529 - -
Prci10g1756 861 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 591 708 - -
Prci10g1756 861 Gene3D - 721 850 IPR023214 -
Prci10g1756 861 Gene3D - 591 703 IPR023214 -
Prci10g1756 861 Pfam Glycosyltransferase family 20 60 545 IPR001830 GO:0003824|GO:0005992
Prci10g1756 861 Pfam Trehalose-phosphatase 595 829 IPR003337 GO:0003824|GO:0005992
Prci10g1756 861 NCBIfam trehalose-phosphatase 590 839 IPR003337 GO:0003824|GO:0005992
Prci10g1756 861 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 548 - -
Prci10g1756 861 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 312 - -
Prci10g1756 861 Gene3D Glycogen Phosphorylase B; 53 312 - -
Prci10g1756 861 Gene3D Glycogen Phosphorylase B; 313 529 - -
Prci10g1756 861 CDD HAD_TPP 593 834 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1756 Prci-Chr10 13210657 13215940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1756 1 861 Trehalose Biosynthesis Gene Families AT1G60140 72.938 0.0 1359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1756 K16055 - gmx:100775779 1510.35