Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci10g1747 | ATGTTGGAGAATGGAATGGTGGATGAGCTGAGGCCACTTTTCAATCCAAAGAGAGACTACTCGCGAGGGATCAGAAAAGCTATTGGAGTTGCTGAGTTCGATCAGTATTTTCAAAAGGAATCGCTTACCATGGATGAAGGAATCAAGCAGAGGTTAGTGGAAGAAGCGGTAAATAATGAAATGAAGAAGAACACGCACGAATTGGCACGTAAACAATTGGGGAAGATTCACAGGCTGCACAAAGTGAAGAGATGGAAAATTCAACGGCTAAACGCGACAACCTTGTTCTGCAAGCATGGGGAAGAAAGAGGTGGTAGAGCCGAGTGCGATGATGGTCGCCAGGTTCCTTTACGATTTTCCCTCTGCTAA | 369 | 0.4526 | MLENGMVDELRPLFNPKRDYSRGIRKAIGVAEFDQYFQKESLTMDEGIKQRLVEEAVNNEMKKNTHELARKQLGKIHRLHKVKRWKIQRLNATTLFCKHGEERGGRAECDDGRQVPLRFSLC | 122 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci10g1747 | 122 | PANTHER | TRNA DIMETHYLALLYLTRANSFERASE | 1 | 97 | IPR039657 | - | |
| Prci10g1747 | 122 | Gene3D | Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain | 1 | 85 | - | - | |
| Prci10g1747 | 122 | Pfam | IPP transferase | 1 | 73 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Prci10g1747 | Prci-Chr10 | 12947499 | 12948797 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Prci10g1747 | 1 | 102 | C2H2 Transcription Factor Family | AT2G27760 | 28.346 | 1.97e-09 | 52.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci10g1747 | K10760 | - | pcin:129284445 | 252.677 |