Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1732 ATGAAGTTTCAAAGGAAAAACTCCTTCATATTACTTCTTTTGTGCATCACCCTTGATCAAGCGTGTTCTCAAACTTCTGCTCCTGATTGCATCCTTGACATTCAGTCTTCTACATCCTTGAATAATAATAGCTCTGATTGTGAATTGCACAATTGGGGAGGGTTTATAAATAGCTGTTGTGGATTGGATTTTAACGGTTACATTTATGCTTTAGGGACGCATGCCAACGAAACTGGAAAAATATACTTGAATTCCTCAGAGCAAGAAACTTGTTTGGCATCGAATGTGTTTGCGAAGAATATTAAAGGATGTGGAGTGGAGAAGCTAAGCACTGGAGCTGGTGGTTGCTCTGAATTCTCTATCACAGATGTCATGGACAAACTTGGGGACAACTTGAGAAGATTAGATGAAGATTGTATGCCTTTAAGCAAGAATGGAAGAGCAAATGAGACTTGTACAGCATGTCTAAGAAGGTGGGAGGAGATTAGTGCAACATCGGACAGTAAAAAGGAGTCAGAGTCAGCAGATTTTGATGCTAATCTCTGTAGGTTTGCAGTACTAATCTCACTTACAAGCATTCATGATAGGGAGTCAATTCAGGCAGTTTATGAATGTCTTGGAACCTACAGCCCCTCAGCTGAAAAGCAAGAAGGCAAAACTGGTGGCAATTCTAAGCTCATCCCAGGTCTCTGGATTTTACCCTTTGGCTTAATTGGAATCACAGTGATAGGGTTTCTTGCAGCATGGGCCTTGAATGGAAGAAGAACTAGAAGTCCTCCAACAAAAAAAGAAGAGGCAGAGGATTCAAGATCTCTTAAGAAAACTATGAAGGAAGTTTATATAGCGACCAACAATCTTGATGCATCAAATTTCATTGGTCAAGGCACAGCTGGAAAAGTGTACAAAGGCATACTTTCGAACGGTCAGCATGTAGCTGTCAAGCATATCATCAGTGAAGCGTATTTAGAGACATTTGTTAGAGAAGTGAGAAGCCTTTCCCATGTCAGACATCCAAACTTGGTATCTTTGGTTGGATACTGTGAAACTGAAGGTGAATGCTTCCTGGTGTATGAGCTGTGTCATGAAGGAAACCTCTCGGATTGGCTATATGACAAAGATAAAGTTCTTTCGTGGATTCAAAGACTGAAAATTGCAGTTGATTGTGCAAGAGGTCTAATGTTTCTCCATACCTATCCAGGTGGCTGCATTATTCACCGAGACATTAAGCCATCAAACATTCTGATTGACACCAACATGCAAGCAAAGCTTTCAGACTTTGGATTGTCCAAGGTAATGGAACTGGACCAATCATTTGTGAGCTCTGAGGTGAGAGGAACATTAGGTTACATCGATCCTGAATACAGGAAAAACCGCCATGTAAAAGCCTCAGGAGATGTCTACAGTTTTGGAATCGTATTACTGCAATTACTTTCAGGACAGAAGGTCCTTAACTTCAATTTTCAGAGACCAATGTCCCTAGATAAAATGGCTAGAAATTTTGCTAGAGGTGGAGATATATCAGAGTTTGCTGATCCTAAACTCAGAGGGGAGTACTCTGGAGAAGCATTTAGCCTCACACTAAAGCTAGCCGTGTCATGCATAGGACTCAAGCAGCAAAGGCCATCTATGGAGCAAGTGTTACGCAGCATAGAGAAGGCATTGGAAATCACATCACAAGCTAAATCATTCACATCTTTCACTGTGTGA 1707 0.4107 MKFQRKNSFILLLLCITLDQACSQTSAPDCILDIQSSTSLNNNSSDCELHNWGGFINSCCGLDFNGYIYALGTHANETGKIYLNSSEQETCLASNVFAKNIKGCGVEKLSTGAGGCSEFSITDVMDKLGDNLRRLDEDCMPLSKNGRANETCTACLRRWEEISATSDSKKESESADFDANLCRFAVLISLTSIHDRESIQAVYECLGTYSPSAEKQEGKTGGNSKLIPGLWILPFGLIGITVIGFLAAWALNGRRTRSPPTKKEEAEDSRSLKKTMKEVYIATNNLDASNFIGQGTAGKVYKGILSNGQHVAVKHIISEAYLETFVREVRSLSHVRHPNLVSLVGYCETEGECFLVYELCHEGNLSDWLYDKDKVLSWIQRLKIAVDCARGLMFLHTYPGGCIIHRDIKPSNILIDTNMQAKLSDFGLSKVMELDQSFVSSEVRGTLGYIDPEYRKNRHVKASGDVYSFGIVLLQLLSGQKVLNFNFQRPMSLDKMARNFARGGDISEFADPKLRGEYSGEAFSLTLKLAVSCIGLKQQRPSMEQVLRSIEKALEITSQAKSFTSFTV 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1732 568 FunFam probable receptor-like protein kinase At5g59700 360 567 - -
Prci10g1732 568 FunFam Serine/threonine kinase protein 252 359 - -
Prci10g1732 568 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 161 551 - -
Prci10g1732 568 SMART serkin_6 286 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1732 568 Pfam Protein kinase domain 290 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1732 568 SUPERFAMILY Protein kinase-like (PK-like) 271 549 IPR011009 -
Prci10g1732 568 Gene3D Phosphorylase Kinase; domain 1 249 359 - -
Prci10g1732 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Prci10g1732 568 Pfam SPARK 26 171 IPR043891 -
Prci10g1732 568 ProSiteProfiles Protein kinase domain profile. 286 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1732 568 Gene3D Transferase(Phosphotransferase) domain 1 361 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1732 Prci-Chr10 12786398 12789551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1732 282 556 Receptor kinase-like Gene Family AT5G59700 41.637 1.85e-58 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Prci10g1732 Pkinase 4.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1732 - - gmx:100790181 739.184