Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1703 ATGTCTGCCTGTGCTTCAATCTCCTCCACAACTTCCCACCTCAGAACCCTCCCCTCTTCTCTACCTTCCACCACCATCTCTTCTCCTCCTCTCGGATTTTCCCTCACTTCCCGGGAAAATCGAAGACACCTCATACCCACGACCACCTCTGTCCAAAAGCATGCTCTTTTTTCATCCAGGTCTGGCAGATTCGTGGTGAAATCCCAGGCCACTAGTGCTCCTGCTTCTTCTGAGTCTGTCACTGTGACACCCGTACCTTCCCAAATGAAGGCTTGGGTTTATGGAGAGTATGGGGGTGTGGATGTTTTGAAGTTCGATTCCAACGTTGGTGTGCCTGATTTTAAGGACGATGAGGTGCTCATTAAGGTTGTCGCTGCGGCTCTTAACCCTGTTGACGCTAAGAGGAGGCAGGGCAAGTTCAAGGCCACTGATTCTCCCCTTCCGACTGTTCCAGGTTATGATGTTGCCGGTATAGTGGCAAAGGTTGGTAGTCAAGTGAAAGACTTCAAAGTGGGTGATGAAGTCTATGGGGACATAAATGAGAAGGCTCTTGAGGGACCTAAGCAGTTTGGAACTCTGGCAGAGTATACTGCTGTTGAAGCAAAATTGTTAGCACCAAAACCTAAGAATTTGGATTTTGCTCAGGCTGCTGGTCTTCCTCTTGCAATTGAGACAGCGTATGAGGGCTTGGAGAGGACCGGCTTTTCAGCTGGTAAATCTATTCTTGTTCTGAATGGTTCTGGTGGAGTTGGAAGCCTAGTGATTCAGCTAGCTAAGCAAGTATTTGGCGCTTCAAGAGTGGCTGCCACGTCAAGCACTAGAAATCTGGAACTGCTAAAGAGCTTGGGTGCTGATTTGGCTATTGACTACACAAAAGAGAACTTTGAAGATTTGCCTGAAAAATTTGATGTGGTTTATGATGCCATTGGGCAATGCGACCGAGCAGTGAAGGCTGTAAAAGAAGGAGGTAGTGTGGTGGCGCTGACTGGAGCCGTGACGCCACCTGGGTTCAGATTCGTGGTGACATCCAATGGAGAAGTTCTGAGGAAACTGAACCCTTACTTGGAGAGTGGAAAGGTAAAGGCAATTGTAGATCCCAAAGGTCCATTCTCATTTGCTCAGGTTGTTGATGCCTTCTCTTACCTTGAAACCAATAAAGCAACTGGAAAAGTTGTCATCCATCCAATCCCATGA 1194 0.4774 MSACASISSTTSHLRTLPSSLPSTTISSPPLGFSLTSRENRRHLIPTTTSVQKHALFSSRSGRFVVKSQATSAPASSESVTVTPVPSQMKAWVYGEYGGVDVLKFDSNVGVPDFKDDEVLIKVVAAALNPVDAKRRQGKFKATDSPLPTVPGYDVAGIVAKVGSQVKDFKVGDEVYGDINEKALEGPKQFGTLAEYTAVEAKLLAPKPKNLDFAQAAGLPLAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLELLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAVKEGGSVVALTGAVTPPGFRFVVTSNGEVLRKLNPYLESGKVKAIVDPKGPFSFAQVVDAFSYLETNKATGKVVIHPIP 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1703 397 CDD MDR_like_2 89 393 - -
Prci10g1703 397 Pfam Zinc-binding dehydrogenase 282 393 - -
Prci10g1703 397 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 80 397 IPR044626 GO:0016628
Prci10g1703 397 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 211 336 IPR036291 -
Prci10g1703 397 MobiDBLite consensus disorder prediction 1 32 - -
Prci10g1703 397 Gene3D - 230 344 - -
Prci10g1703 397 SMART PKS_ER_names_mod 98 393 IPR020843 GO:0016491
Prci10g1703 397 Gene3D - 96 393 - -
Prci10g1703 397 Pfam Alcohol dehydrogenase GroES-like domain 117 179 IPR013154 -
Prci10g1703 397 SUPERFAMILY GroES-like 86 243 IPR011032 -
Prci10g1703 397 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 238 259 IPR002364 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1703 Prci-Chr10 12538284 12541266 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1703 117 340 Monolignol Biosynthesis Gene Families AT3G19450 24.125 1.80e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1703 K18980 - gmx:100810816 601.668