Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1688 ATGCGAGAATTTTTCGGGGCTTACGATTCAGTTGCATTGCTCAAATGGCTTCTCGTTTTCATAATTCCAGCTGCTTTTCCAGCCAACTTATCAGTTTTATCTGTTTGCCTCTGCTTGGAATGGATGTCGAAGAATCGAGGAAGATTTAGATTGGCCCGTCGTTTTGGGAATCGCGTTGGGAAATTTCTGATCGTTGAATCAGAAATGGCTTCCCGGAGCTTCAACGTTGGTTCCAATTCGAAATCAAGCGGGATCTCGTTTTCTTCTAGATTGTTGACCGAGGATGCGGCTCCATCGCCAGATTCTCCCTCGTCATCCAATAGTACGAGATCTCCGCCTCCATCGACTTCGCCGCCGTCGGGTTCACCGCCTTCAGCAAGTCCGCCTCCATCGCCACGACCAACCCCTTCTTCGTCCCCTCTTTCTTCGCCGCCTCCATCACCACCACAGTCTTCGCCACCTCCACCATCGTCTCCTCCCTCTAAACGGTTGCCACCGCCATCGTCTCCTCCCCCTAAACTGTCTCCACCGCCATCGTCTCCTCCCCCTAAGTCATCGTCACCTCCATCACAATCACGACCCCCACCTCCACCTGATCAATCTTCTCCGCTTCCATCCTCGCCTCCAACTTCACCTTCATCTCCGCCTCAACTGCAGAACTCGTCTACACCACTGACACCAGGATCCCCAAATAACTCATCAGCCACCGGCAACCCTTCACCACCTCCTTCAACTACTGTTTCCCCTCCAGTTGCCGTTTCCCCGCCAAATACGCCAAGCTTTGCTCCGCCAACAAGGGTGTGGAGCCCTCCTCCGCTGCCGCACTCACCTTCCACCACAAACTCAAGTGGTTCATCGAGTGACTCCATGTCCCTCTCATCGTCAAGAGGGAACAGCAGCGGTGGTAATTCCGAAAAGTACATTGGTTATGCTGTGGCCGGAGTGCTCGGTTTTATCCTGCTTGCCATATTGATTGTTTTCGTGGTAAAGAGGAAAAGAAAAAGAAAAGTGGCCCATGCTACACACTATGACGCTGCCAATAACTTGCATAAGAAACCAGGTACGGAAGGGCTTTACCATGCGCAGCAGCCTGGGAAAGCGAATTATGCACAAGAGGGCTGTGCAACAAGCTCTCCCAACAAGGGAAATGGGGGTAAAGCAGGAGCAGTACAACATTTTGGGACTCCAGACTCGCCCTGGAGTAATGGTCAGATATCTTTTAGCTATGAGCAGATTACAGAGATAACTCAAAGATTTTCTAGTGAAAATATTGTAGGGGAGGGGGGATTTGGATGTGTATACAAGGGATGGCTTTCAGATGGTAAACAAGTGGCTGTGAAGCAGCTTAAGGCTGGCAGCGGCCAAGGTGAACGGGAATTTAGGGCAGAGGTTGAGATTATCAGCCGTGTTCATCATCGGCATTTGGTATCGTTAGTTGGTTATTGCATAGCCGATCACCGAAGAGTTCTTATTTACGAGTTCCTTCCCAATAAAACTCTAGAATATCACTTGCATGCCAGAGGAGTGAAAGTCTTAGATTGGAACATGAGGATGAAGATTGCAATTGGCTCTGCAAAAGGCTTAGCATATTTGCATGAAGACTGCAACCCAAAAATTATCCACAGAGATATTAAGTCAGCGAACATACTTTTGGATAATGCGTTTGAAGCAAAGGTTGCAGACTTTGGACTTGCTAGGCTACACGACGATGCTAACACGCACGTATCAACTCGGGTTGTGGGGACTTTTGGGTACTTGGCTCCAGAGTATGCAACCAGTGGAAAATTGACCGATAGATCAGATGTTTTCTCCTTCGGAGTTGTCCTCCTTGAACTTATAACAGGGAGGAAACCTGTTGATCAAACTCGGCCAGTGGGAGAAGAGAGTTTGGTTGAATGGGCTCGTCCACTTCTGAATCATGCTATTGAGACCCGAGACTTCACTGAATTAGTGGACAAAAGGCTTAACATGCAATTTGTGGAGAATGAGATGTTTCGAATGATTGAAGCTGCCGCAGCTTGTGTTCGCCACTCTGCTCCTAAACGGCCTCGTATGATTCAGGTGGAAAGAGCATTAGATAGTCAAGATGAATCATGTGATTTATCAAATGGGGTTAAATATGGTCAGAGCACTATTTATGATGCCGGCCACTATAGTGAAGATGCTATTATGAAATTCAGGAAGATGGCCATTGGTAGCTGTAGTGAATCTGAATTTGATAGGGACAGCGGAAATTACTCTTCTTCAGCAGAGTTCTCTGGACAACATACATGGCTCACGGGTGCTTCAAGTGGCGAGTCAGAGTCCCGAGCTTTCAATGCAAGTAAAAGGACTTAG 2337 0.4805 MREFFGAYDSVALLKWLLVFIIPAAFPANLSVLSVCLCLEWMSKNRGRFRLARRFGNRVGKFLIVESEMASRSFNVGSNSKSSGISFSSRLLTEDAAPSPDSPSSSNSTRSPPPSTSPPSGSPPSASPPPSPRPTPSSSPLSSPPPSPPQSSPPPPSSPPSKRLPPPSSPPPKLSPPPSSPPPKSSSPPSQSRPPPPPDQSSPLPSSPPTSPSSPPQLQNSSTPLTPGSPNNSSATGNPSPPPSTTVSPPVAVSPPNTPSFAPPTRVWSPPPLPHSPSTTNSSGSSSDSMSLSSSRGNSSGGNSEKYIGYAVAGVLGFILLAILIVFVVKRKRKRKVAHATHYDAANNLHKKPGTEGLYHAQQPGKANYAQEGCATSSPNKGNGGKAGAVQHFGTPDSPWSNGQISFSYEQITEITQRFSSENIVGEGGFGCVYKGWLSDGKQVAVKQLKAGSGQGEREFRAEVEIISRVHHRHLVSLVGYCIADHRRVLIYEFLPNKTLEYHLHARGVKVLDWNMRMKIAIGSAKGLAYLHEDCNPKIIHRDIKSANILLDNAFEAKVADFGLARLHDDANTHVSTRVVGTFGYLAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDQTRPVGEESLVEWARPLLNHAIETRDFTELVDKRLNMQFVENEMFRMIEAAAACVRHSAPKRPRMIQVERALDSQDESCDLSNGVKYGQSTIYDAGHYSEDAIMKFRKMAIGSCSESEFDRDSGNYSSSAEFSGQHTWLTGASSGESESRAFNASKRT 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1688 778 SUPERFAMILY Protein kinase-like (PK-like) 400 692 IPR011009 -
Prci10g1688 778 MobiDBLite consensus disorder prediction 757 771 - -
Prci10g1688 778 FunFam Proline-rich receptor-like protein kinase PERK8 394 494 - -
Prci10g1688 778 ProSiteProfiles Protein kinase domain profile. 419 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1688 778 MobiDBLite consensus disorder prediction 369 388 - -
Prci10g1688 778 PRINTS Proline rich extensin signature 156 181 - -
Prci10g1688 778 PRINTS Proline rich extensin signature 119 135 - -
Prci10g1688 778 PRINTS Proline rich extensin signature 98 119 - -
Prci10g1688 778 PRINTS Proline rich extensin signature 136 153 - -
Prci10g1688 778 SMART serkin_6 419 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1688 778 CDD STKc_IRAK 425 693 - -
Prci10g1688 778 MobiDBLite consensus disorder prediction 112 215 - -
Prci10g1688 778 MobiDBLite consensus disorder prediction 757 778 - -
Prci10g1688 778 MobiDBLite consensus disorder prediction 369 384 - -
Prci10g1688 778 MobiDBLite consensus disorder prediction 93 111 - -
Prci10g1688 778 Gene3D Transferase(Phosphotransferase) domain 1 495 709 - -
Prci10g1688 778 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 318 736 IPR047117 -
Prci10g1688 778 MobiDBLite consensus disorder prediction 216 241 - -
Prci10g1688 778 MobiDBLite consensus disorder prediction 242 277 - -
Prci10g1688 778 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Prci10g1688 778 Gene3D Phosphorylase Kinase; domain 1 389 494 - -
Prci10g1688 778 ProSitePatterns Protein kinases ATP-binding region signature. 425 447 IPR017441 GO:0005524
Prci10g1688 778 MobiDBLite consensus disorder prediction 93 303 - -
Prci10g1688 778 Pfam Protein tyrosine and serine/threonine kinase 422 691 IPR001245 GO:0004672|GO:0006468
Prci10g1688 778 MobiDBLite consensus disorder prediction 278 303 - -
Prci10g1688 778 FunFam proline-rich receptor-like protein kinase PERK8 495 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1688 Prci-Chr10 12471923 12479137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1688 298 747 Trihelix Transcription Factor Family AT1G70460 63.636 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Prci10g1688 PK_Tyr_Ser-Thr 6.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1688 - - pcin:129322412 1029.24