Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1641 ATGGAGGAAATGTACGGCCTCCCGTCGTCCCCTGAGGATTACTCGGACAAAGCCATCATGACGCCCGACAATCTGATCTTCCCGGCCGACTACCAGAGCTTCCTCATGTCTTCCTCCGCCGCCGCCGCCGGCTTCCGTGATCGGATTCCCGTTTTAGGATCCGAAGAGTTGCTGTCCGCTGCCTCCGCGATTACCGAAGTCGAAGCCTCCGTCGCTGCTCCTGAATTTCGGCCACAAGAGGACTCTTCCTCCGTCATCAAAGCCAGAATCGCGTCTCATCCTAACTATCCTCGTCTCATTCAAGCTTATATCGATTGCCAGAAGGTAGGAGCACCTCCAGAAATAGCGTGTTTCTTAGATGAAATCCGGCGAGAAAACGACCTCAACAAGAGGGACGTTGTTTCCACGTGCTTTGGAGACGACCGCGAGCTCGACGAGTTCATGGAAACCTACTGCGACGTGCTGTTGAAGTATAAATCTGATCTTGCCCGGCCTTTTGATGAAGCAACCTCTTTCCTTAACAAGATCGAAACCCAGCTCACCAATCTCTGCAGTGGTGCTTCCCTTCTAAGCCTTCCCGCGCAGCGGGTGATCGGCAAGAGTTATCACTCTCACATGCACTCCCGCAGATTTCGCTGGGATATGAGGCAGCTTTTTGGCTCTCAACTTAATAAAACGTTCAAGCATTTGCCTTGCCTCGCCTTATCTTCCCCCACGCACCTGTGTTGCTTTCTGCTTGCCATTTGTTCTCTGTGTTGGGGCCCATCCCGGGCCTCTCTGCCAGCTTCTGTGTTTACTTAA 801 0.5281 MEEMYGLPSSPEDYSDKAIMTPDNLIFPADYQSFLMSSSAAAAGFRDRIPVLGSEELLSAASAITEVEASVAAPEFRPQEDSSSVIKARIASHPNYPRLIQAYIDCQKVGAPPEIACFLDEIRRENDLNKRDVVSTCFGDDRELDEFMETYCDVLLKYKSDLARPFDEATSFLNKIETQLTNLCSGASLLSLPAQRVIGKSYHSHMHSRRFRWDMRQLFGSQLNKTFKHLPCLALSSPTHLCCFLLAICSLCWGPSRASLPASVFT 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1641 266 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 78 185 - -
Prci10g1641 266 SMART KNOX1_2 84 128 IPR005540 GO:0003677|GO:0005634
Prci10g1641 266 SMART KNOX2_2 134 185 IPR005541 GO:0003677|GO:0005634
Prci10g1641 266 Pfam KNOX2 domain 138 184 IPR005541 GO:0003677|GO:0005634
Prci10g1641 266 Pfam KNOX1 domain 86 127 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1641 Prci-Chr10 12013857 12022902 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1641 1 187 Homeobox Transcription Factor Family AT1G23380 61.340 2.58e-70 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1641 - - vri:117903949 266.929