Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1614 ATGGCTCTGCATCTTAGCGCTTATCAGCCTCACTTATTGTCTTCATTATCAGTCCGTCAAGAACATACTACGAAGCCTTTGATCAGAGTTTCTCTGCATCCCTTCCATTTGGCTGCTAATTCTAGAATTCCACCTCTTCACTCCCCTCCTGCTTTCATTTCCAGGCGCGTTGTTCCAATCCCTCTAAAATCTTCGTCCACAAATGGGGTCTCCCTTCAGAACCATTTTGCCGCTTCGAGGGAGGACCATGGCCATGGGGAATATGAAGACAATGTTGAGTTTCTGGAGAGGCTTAGAAGATGGTTCGGTGTCTTTCTTTCGATTTTGCCAGGTGGCGGATGGTGGGACTTCTCCGATGATGTCAATGTTCAAGGTCTTTCCGAGGCCAAGCCGGTGACTGTTTGGCGCGTGCTTGCCAAAATGTGGGAACTTGTTGCTCAAGACAGCTGGGTTATTTTCGCGGCGTTCTCGACTCTGGTTCTTGCAGCTGTTTCGGATATTTCGATACCACATTTCTTAACTGCATCCATCTTTTCCGCTCAGAGCGCGGAAATTACAGTCTTCCATCGGAATGTGCGTCTCTTGGTTCTTCTGTGTTTAACTTCCGGACTATGCAGTGGGATACGGGGTTGCTGTTTTGGCGTTGCAAACATGATTTTGGTTAAGAGGATGAGAGAAACATTATACTCTTCCCTACTTCTTCAGGATATATCATTTTATGACACCGAAACAGTTGGCGATTTGACAAGCAGGCTTGGGGCAGATTGTCAACAAGTGTCACGTGTTATTGGAAATGATCTTAACTTGATATTGCGCAATGTTCTTGAGGGAGCAGGTGTATTGATCTACCTTTTGGCTTTGTCTTGGCCTCTTGGATTGTGTACATTGGGTATATGCACTATATTATCGGTAGTTATGCTAATTTATGGAAGGTATCAGAAAAATGCTGCAAGGTTGATCCAAGAAGTTACTGCCTCTGCAAATCAAGTAGCTCAGGAAACATTCTCGCTCATTAGGACTGTCCGTGTTCATGGAACTGAAGGAGAAGAACTTGGGAGATACCAATGGTGGCTGAGGAAGCTAGCTGATATAAGTTTGCGACAAAGTGTTGCATATGGATTTTGGAATTTAAGTTTCAACACTCTTTATCATTCTAGTCAGGTTATTGCCGTGCTGTTTGGAGGAATGTTCATTCAAGCAGGTCATATTACCCCAGAGAAGCTCACCAAGTTCATTATGTACAGTCAATGGCTCATTTATTCAACCTGGTTGGTTGGAGACAATATATCCTCTTTGATGCAATCAGTTGGAGCTAGTGAAAAAGTATTTCATTTCATGGATCTCTTACCAAGCAGCCAATTCATAGCAAGGGGGGTAAAGTTGCAGAGATTAATGGGGCATGTTGATTTTATAAATATTTCTTTTCACTACCCATCAAGGCCAACGGTACCTGTAGTCCAACATGTAAGCTTTTCTGTTCATCCTGGTGAGGTGGTTGCAATTGTTGGTCTTAGTGGTAGTGGAAAAAGCACACTGGTAAACCTTTTGCTCCGGCTATATGAGCCAACAAATGGTCAGATTTTGATTGATGGCTACCCTCTTAAAGAGTTGGACGTCATGTGGTGGAGAGAAAGAACTGGTTATGTGGGACAGGAGCCGAAGCTCTTTCGCATGGATATTAGTTCAAACATCAGATATGGATGCACACGTGATATAAAGCAGGATGATATTGAACGGGCTGCCAAGCAGGCCTATGCTCATGACTTCATCGCAGCACTTCCTAATGGTTATGAAACACTTGTTGATGATGATCTGTTAAGTGGGGGACAAAGGCAGCGAATTGCCATTGCAAGGGCCATCGTTAGGGACCCAACTATTTTGATCCTTGATGAAGCCACCAGTGCACTGGATGCTGAGAGTGAATATAATGTCCAGGGTGTTTTTCGTTCTGTCAGAAGCGACTCCACACCGAGAAGCGTCATAGTCATTGCACACAGGCTTTCTACAATCAAAGCAGCTGACAGGATTGTGGTAATTGATGGTGGTCGAGTTGTTGAGATTGGAAGTCACAGGGAACTTCTCTTAAAGGATGGTTTATATGCACGACTGACCAGAAAACAGGCTGACACAATGTCATGA 2139 0.4413 MALHLSAYQPHLLSSLSVRQEHTTKPLIRVSLHPFHLAANSRIPPLHSPPAFISRRVVPIPLKSSSTNGVSLQNHFAASREDHGHGEYEDNVEFLERLRRWFGVFLSILPGGGWWDFSDDVNVQGLSEAKPVTVWRVLAKMWELVAQDSWVIFAAFSTLVLAAVSDISIPHFLTASIFSAQSAEITVFHRNVRLLVLLCLTSGLCSGIRGCCFGVANMILVKRMRETLYSSLLLQDISFYDTETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLEGAGVLIYLLALSWPLGLCTLGICTILSVVMLIYGRYQKNAARLIQEVTASANQVAQETFSLIRTVRVHGTEGEELGRYQWWLRKLADISLRQSVAYGFWNLSFNTLYHSSQVIAVLFGGMFIQAGHITPEKLTKFIMYSQWLIYSTWLVGDNISSLMQSVGASEKVFHFMDLLPSSQFIARGVKLQRLMGHVDFINISFHYPSRPTVPVVQHVSFSVHPGEVVAIVGLSGSGKSTLVNLLLRLYEPTNGQILIDGYPLKELDVMWWRERTGYVGQEPKLFRMDISSNIRYGCTRDIKQDDIERAAKQAYAHDFIAALPNGYETLVDDDLLSGGQRQRIAIARAIVRDPTILILDEATSALDAESEYNVQGVFRSVRSDSTPRSVIVIAHRLSTIKAADRIVVIDGGRVVEIGSHRELLLKDGLYARLTRKQADTMS 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1614 712 FunFam Multidrug ABC transporter ATP-binding protein 460 711 - -
Prci10g1614 712 SMART AAA_5 495 683 IPR003593 GO:0016887
Prci10g1614 712 Gene3D ABC transporter type 1, transmembrane domain 136 453 IPR036640 GO:0005524|GO:0016020
Prci10g1614 712 FunFam ABC transporter B family member 26, chloroplastic 134 453 - -
Prci10g1614 712 ProSitePatterns ABC transporters family signature. 606 620 IPR017871 GO:0005524|GO:0016887
Prci10g1614 712 SUPERFAMILY ABC transporter transmembrane region 140 450 IPR036640 GO:0005524|GO:0016020
Prci10g1614 712 Pfam ABC transporter transmembrane region 158 419 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci10g1614 712 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 460 707 IPR027417 -
Prci10g1614 712 CDD ABC_6TM_TAP 155 442 - -
Prci10g1614 712 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 150 434 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci10g1614 712 Gene3D - 458 712 IPR027417 -
Prci10g1614 712 Pfam ABC transporter 487 634 IPR003439 GO:0005524
Prci10g1614 712 PANTHER ABC TRANSPORTER B FAMILY 146 704 IPR039421 -
Prci10g1614 712 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 468 706 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1614 Prci-Chr10 11676486 11684024 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1614 223 707 Calmodulin-binding Proteins AT2G36910 35.152 7.44e-73 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1614 - - gmx:100775951 1014.22