Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci10g1614 | ATGGCTCTGCATCTTAGCGCTTATCAGCCTCACTTATTGTCTTCATTATCAGTCCGTCAAGAACATACTACGAAGCCTTTGATCAGAGTTTCTCTGCATCCCTTCCATTTGGCTGCTAATTCTAGAATTCCACCTCTTCACTCCCCTCCTGCTTTCATTTCCAGGCGCGTTGTTCCAATCCCTCTAAAATCTTCGTCCACAAATGGGGTCTCCCTTCAGAACCATTTTGCCGCTTCGAGGGAGGACCATGGCCATGGGGAATATGAAGACAATGTTGAGTTTCTGGAGAGGCTTAGAAGATGGTTCGGTGTCTTTCTTTCGATTTTGCCAGGTGGCGGATGGTGGGACTTCTCCGATGATGTCAATGTTCAAGGTCTTTCCGAGGCCAAGCCGGTGACTGTTTGGCGCGTGCTTGCCAAAATGTGGGAACTTGTTGCTCAAGACAGCTGGGTTATTTTCGCGGCGTTCTCGACTCTGGTTCTTGCAGCTGTTTCGGATATTTCGATACCACATTTCTTAACTGCATCCATCTTTTCCGCTCAGAGCGCGGAAATTACAGTCTTCCATCGGAATGTGCGTCTCTTGGTTCTTCTGTGTTTAACTTCCGGACTATGCAGTGGGATACGGGGTTGCTGTTTTGGCGTTGCAAACATGATTTTGGTTAAGAGGATGAGAGAAACATTATACTCTTCCCTACTTCTTCAGGATATATCATTTTATGACACCGAAACAGTTGGCGATTTGACAAGCAGGCTTGGGGCAGATTGTCAACAAGTGTCACGTGTTATTGGAAATGATCTTAACTTGATATTGCGCAATGTTCTTGAGGGAGCAGGTGTATTGATCTACCTTTTGGCTTTGTCTTGGCCTCTTGGATTGTGTACATTGGGTATATGCACTATATTATCGGTAGTTATGCTAATTTATGGAAGGTATCAGAAAAATGCTGCAAGGTTGATCCAAGAAGTTACTGCCTCTGCAAATCAAGTAGCTCAGGAAACATTCTCGCTCATTAGGACTGTCCGTGTTCATGGAACTGAAGGAGAAGAACTTGGGAGATACCAATGGTGGCTGAGGAAGCTAGCTGATATAAGTTTGCGACAAAGTGTTGCATATGGATTTTGGAATTTAAGTTTCAACACTCTTTATCATTCTAGTCAGGTTATTGCCGTGCTGTTTGGAGGAATGTTCATTCAAGCAGGTCATATTACCCCAGAGAAGCTCACCAAGTTCATTATGTACAGTCAATGGCTCATTTATTCAACCTGGTTGGTTGGAGACAATATATCCTCTTTGATGCAATCAGTTGGAGCTAGTGAAAAAGTATTTCATTTCATGGATCTCTTACCAAGCAGCCAATTCATAGCAAGGGGGGTAAAGTTGCAGAGATTAATGGGGCATGTTGATTTTATAAATATTTCTTTTCACTACCCATCAAGGCCAACGGTACCTGTAGTCCAACATGTAAGCTTTTCTGTTCATCCTGGTGAGGTGGTTGCAATTGTTGGTCTTAGTGGTAGTGGAAAAAGCACACTGGTAAACCTTTTGCTCCGGCTATATGAGCCAACAAATGGTCAGATTTTGATTGATGGCTACCCTCTTAAAGAGTTGGACGTCATGTGGTGGAGAGAAAGAACTGGTTATGTGGGACAGGAGCCGAAGCTCTTTCGCATGGATATTAGTTCAAACATCAGATATGGATGCACACGTGATATAAAGCAGGATGATATTGAACGGGCTGCCAAGCAGGCCTATGCTCATGACTTCATCGCAGCACTTCCTAATGGTTATGAAACACTTGTTGATGATGATCTGTTAAGTGGGGGACAAAGGCAGCGAATTGCCATTGCAAGGGCCATCGTTAGGGACCCAACTATTTTGATCCTTGATGAAGCCACCAGTGCACTGGATGCTGAGAGTGAATATAATGTCCAGGGTGTTTTTCGTTCTGTCAGAAGCGACTCCACACCGAGAAGCGTCATAGTCATTGCACACAGGCTTTCTACAATCAAAGCAGCTGACAGGATTGTGGTAATTGATGGTGGTCGAGTTGTTGAGATTGGAAGTCACAGGGAACTTCTCTTAAAGGATGGTTTATATGCACGACTGACCAGAAAACAGGCTGACACAATGTCATGA | 2139 | 0.4413 | MALHLSAYQPHLLSSLSVRQEHTTKPLIRVSLHPFHLAANSRIPPLHSPPAFISRRVVPIPLKSSSTNGVSLQNHFAASREDHGHGEYEDNVEFLERLRRWFGVFLSILPGGGWWDFSDDVNVQGLSEAKPVTVWRVLAKMWELVAQDSWVIFAAFSTLVLAAVSDISIPHFLTASIFSAQSAEITVFHRNVRLLVLLCLTSGLCSGIRGCCFGVANMILVKRMRETLYSSLLLQDISFYDTETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLEGAGVLIYLLALSWPLGLCTLGICTILSVVMLIYGRYQKNAARLIQEVTASANQVAQETFSLIRTVRVHGTEGEELGRYQWWLRKLADISLRQSVAYGFWNLSFNTLYHSSQVIAVLFGGMFIQAGHITPEKLTKFIMYSQWLIYSTWLVGDNISSLMQSVGASEKVFHFMDLLPSSQFIARGVKLQRLMGHVDFINISFHYPSRPTVPVVQHVSFSVHPGEVVAIVGLSGSGKSTLVNLLLRLYEPTNGQILIDGYPLKELDVMWWRERTGYVGQEPKLFRMDISSNIRYGCTRDIKQDDIERAAKQAYAHDFIAALPNGYETLVDDDLLSGGQRQRIAIARAIVRDPTILILDEATSALDAESEYNVQGVFRSVRSDSTPRSVIVIAHRLSTIKAADRIVVIDGGRVVEIGSHRELLLKDGLYARLTRKQADTMS | 712 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci10g1614 | 712 | FunFam | Multidrug ABC transporter ATP-binding protein | 460 | 711 | - | - | |
Prci10g1614 | 712 | SMART | AAA_5 | 495 | 683 | IPR003593 | GO:0016887 | |
Prci10g1614 | 712 | Gene3D | ABC transporter type 1, transmembrane domain | 136 | 453 | IPR036640 | GO:0005524|GO:0016020 | |
Prci10g1614 | 712 | FunFam | ABC transporter B family member 26, chloroplastic | 134 | 453 | - | - | |
Prci10g1614 | 712 | ProSitePatterns | ABC transporters family signature. | 606 | 620 | IPR017871 | GO:0005524|GO:0016887 | |
Prci10g1614 | 712 | SUPERFAMILY | ABC transporter transmembrane region | 140 | 450 | IPR036640 | GO:0005524|GO:0016020 | |
Prci10g1614 | 712 | Pfam | ABC transporter transmembrane region | 158 | 419 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Prci10g1614 | 712 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 460 | 707 | IPR027417 | - | |
Prci10g1614 | 712 | CDD | ABC_6TM_TAP | 155 | 442 | - | - | |
Prci10g1614 | 712 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 150 | 434 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Prci10g1614 | 712 | Gene3D | - | 458 | 712 | IPR027417 | - | |
Prci10g1614 | 712 | Pfam | ABC transporter | 487 | 634 | IPR003439 | GO:0005524 | |
Prci10g1614 | 712 | PANTHER | ABC TRANSPORTER B FAMILY | 146 | 704 | IPR039421 | - | |
Prci10g1614 | 712 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 468 | 706 | IPR003439 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci10g1614 | Prci-Chr10 | 11676486 | 11684024 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci10g1614 | 223 | 707 | Calmodulin-binding Proteins | AT2G36910 | 35.152 | 7.44e-73 | 255 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci10g1614 | - | - | gmx:100775951 | 1014.22 |