Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1613 ATGGCTCTGCATCTTAGCGCTTATCAGCCTCACTTATTGTCTTCATTATCAGTCCGTCAAGAACATACTACGAAGCCTTTGATCAGAGTTTCTCTGCATCCCTTCCATTTGGCTGCTAATTCTAGAATTCCACCTCTTCACTCCCCTCCTGCTTTCATTTCCAGGCGCGTTGTTCCAATCCCTCTAAAATCTTCGTCCACAAATGGGGTCTCCCTTCAGAACCATTTTGCCGCTTCGAGGGAGGACCATGGCCATGGGGAATATGAAGACAATGTTGAGTTTCTGGAGAGGCTTAGAAGATGGTTCGGTGTCTTTCTTTCGATTTTGCCAGGTGGCGGATGGTGGGACTTCTCCGATGATGTCAATGTTCAAGGTCTTTCCGAGGCCAAGCCGGTGACTGTTTGGCGCGTGCTTGCCAAAATGTGGGAACTTGTTGCTCAAGACAGCTGGGTTATTTTCGCGGCGTTCTCGACTCTGGTTCTTGCAGCTAGCGCGGAAATTACAGTCTTCCATCGGAATGTGCGTCTCTTGGTTCTTCTGTGTTTAACTTCCGGACTATGCAGTGGGATACGGGGTTGCTGTTTTGGCGTTGCAAACATGATTTTGGTTAAGAGGATGAGAGAAACATTATACTCTTCCCTACTTCTTCAGGATATATCATTTTATGACACCGAAACAGTTGGCGATTTGACAAGCAGGCTTGGGGCAGATTGTCAACAAGTGTCACGTGTTATTGGAAATGATCTTAACTTGATATTGCGCAATGTTCTTGAGGGAGCAGGTGTATTGATCTACCTTTTGGCTTTGTCTTGGCCTCTTGGATTGTGTACATTGGGTATATGCACTATATTATCGGTAGTTATGCTAATTTATGGAAGGTATCAGAAAAATGCTGCAAGGTTGATCCAAGAAGTTACTGCCTCTGCAAATCAAGTAGCTCAGGAAACATTCTCGCTCATTAGGACTGTCCGTGTTCATGGAACTGAAGGAGAAGAACTTGGGAGATACCAATGGTGGCTGAGGAAGCTAGCTGATATAAGTTTGCGACAAAGTGTTGCATATGGATTTTGGAATTTAAGTTTCAACACTCTTTATCATTCTAGTCAGGTTATTGCCGTGCTGTTTGGAGGAATGTTCATTCAAGCAGGTCATATTACCCCAGAGAAGCTCACCAAGTTCATTATGTACAGTCAATGGCTCATTTATTCAACCTGGTTGGTTGGAGACAATATATCCTCTTTGATGCAATCAGTTGGAGCTAGTGAAAAAGTATTTCATTTCATGGATCTCTTACCAAGCAGCCAATTCATAGCAAGGGGGGTAAAGTTGCAGAGATTAATGGGGCATGTTGATTTTATAAATATTTCTTTTCACTACCCATCAAGGCCAACGGTACCTGTAGTCCAACATGTAAGCTTTTCTGTTCATCCTGGTGAGGTGGTTGCAATTGTTGGTCTTAGTGGTAGTGGAAAAAGCACACTGGTAAACCTTTTGCTCCGGCTATATGAGCCAACAAATGGTCAGATTTTGATTGATGGCTACCCTCTTAAAGAGTTGGACGTCATGTGGTGGAGAGAAAGAACTGGTTATGTGGGACAGGAGCCGAAGCTCTTTCGCATGGATATTAGTTCAAACATCAGATATGGATGCACACGTGATATAAAGCAGGATGATATTGAACGGGCTGCCAAGCAGGCCTATGCTCATGACTTCATCGCAGCACTTCCTAATGGTTATGAAACACTTGTTGATGATGATCTGTTAAGTGGGGGACAAAGGCAGCGAATTGCCATTGCAAGGGCCATCGTTAGGGACCCAACTATTTTGATCCTTGATGAAGCCACCAGTGCACTGGATGCTGAGAGTGAATATAATGTCCAGGGTGTTTTTCGTTCTGTCAGAAGCGACTCCACACCGAGAAGCGTCATAGTCATTGCACACAGGCTTTCTACAATCAAAGCAGCTGACAGGATTGTGGTAATTGATGGTGGTCGAGTTGTTGAGATTGGAAGTCACAGGGAACTTCTCTTAAAGGATGGTTTATATGCACGACTGACCAGAAAACAGGCTGACACAATGTCATGA 2085 0.4422 MALHLSAYQPHLLSSLSVRQEHTTKPLIRVSLHPFHLAANSRIPPLHSPPAFISRRVVPIPLKSSSTNGVSLQNHFAASREDHGHGEYEDNVEFLERLRRWFGVFLSILPGGGWWDFSDDVNVQGLSEAKPVTVWRVLAKMWELVAQDSWVIFAAFSTLVLAASAEITVFHRNVRLLVLLCLTSGLCSGIRGCCFGVANMILVKRMRETLYSSLLLQDISFYDTETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLEGAGVLIYLLALSWPLGLCTLGICTILSVVMLIYGRYQKNAARLIQEVTASANQVAQETFSLIRTVRVHGTEGEELGRYQWWLRKLADISLRQSVAYGFWNLSFNTLYHSSQVIAVLFGGMFIQAGHITPEKLTKFIMYSQWLIYSTWLVGDNISSLMQSVGASEKVFHFMDLLPSSQFIARGVKLQRLMGHVDFINISFHYPSRPTVPVVQHVSFSVHPGEVVAIVGLSGSGKSTLVNLLLRLYEPTNGQILIDGYPLKELDVMWWRERTGYVGQEPKLFRMDISSNIRYGCTRDIKQDDIERAAKQAYAHDFIAALPNGYETLVDDDLLSGGQRQRIAIARAIVRDPTILILDEATSALDAESEYNVQGVFRSVRSDSTPRSVIVIAHRLSTIKAADRIVVIDGGRVVEIGSHRELLLKDGLYARLTRKQADTMS 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1613 694 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 442 689 IPR027417 -
Prci10g1613 694 Gene3D - 448 691 IPR027417 -
Prci10g1613 694 SUPERFAMILY ABC transporter transmembrane region 143 432 IPR036640 GO:0005524|GO:0016020
Prci10g1613 694 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 450 688 IPR003439 GO:0005524
Prci10g1613 694 Gene3D ABC transporter type 1, transmembrane domain 177 447 IPR036640 GO:0005524|GO:0016020
Prci10g1613 694 PANTHER ABC TRANSPORTER B FAMILY 153 686 IPR039421 -
Prci10g1613 694 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 176 416 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci10g1613 694 FunFam Multidrug ABC transporter ATP-binding protein 442 693 - -
Prci10g1613 694 SMART AAA_5 477 665 IPR003593 GO:0016887
Prci10g1613 694 ProSitePatterns ABC transporters family signature. 588 602 IPR017871 GO:0005524|GO:0016887
Prci10g1613 694 Pfam ABC transporter 469 616 IPR003439 GO:0005524
Prci10g1613 694 CDD ABC_6TM_TAP 155 424 - -
Prci10g1613 694 Pfam ABC transporter transmembrane region 176 401 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1613 Prci-Chr10 11676486 11684024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1613 205 689 Calmodulin-binding Proteins AT2G36910 35.152 6.12e-73 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1613 - - gmx:100775951 973.77