Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1611 ATGGTTGGACCCTCCCAACCTCCTAAGTCCACCCTCAAGTTCCTCTGTAGCTACGGCGGCAAAATCCTTCCCCGCTATCCCGACGGCAAGCTCCGTTATATCGGTGGCCATACGCGTGTCCTCTCCGTCGACCGCTCTATTCCCTTTTCCGAGCTGTTGGTGAAGTTGGGAGAGCTCTGTGGCTCGGCAACTGTGATACTTCGCTGTCAATTTCCCACCGAAGATCTCGATGCTTTGGTATCCATCAGCTCCGACGAGGATCTGGCGAATCTTATCGAGGAATACGATCTTGTTGCGCCGCCTTCGTCTTTAAAGATTAGAGCGTTCCTTTCGCCGCCGAAATCGTTCCAGAAAAAAACTTCTATTCCGTCCTCCTCGTCTATGTTAAAATCATCATCATCTTCATCAACATCGTCGCCGTCGTCGTCGCCTCACAATTCTACTGCTGGTAGTTGTGGATGTTCTACTTGTGGCTGTAGTCCTAGGTATTCGGTGTTGGTGACGCCGGTCGTCGAGCGATGTGTACATCAGATGTTGGCGCCGATGGCGTATGACATGAGAAAATCTGCTGGGAGGAATATTCCTCTTCCTCAATATGCTTACCCGATGCAGGGTAACCCACGCCACATTAGCGTTGTGCACAGCGGGAACCACTGGCAATAG 663 0.5158 MVGPSQPPKSTLKFLCSYGGKILPRYPDGKLRYIGGHTRVLSVDRSIPFSELLVKLGELCGSATVILRCQFPTEDLDALVSISSDEDLANLIEEYDLVAPPSSLKIRAFLSPPKSFQKKTSIPSSSSMLKSSSSSSTSSPSSSPHNSTAGSCGCSTCGCSPRYSVLVTPVVERCVHQMLAPMAYDMRKSAGRNIPLPQYAYPMQGNPRHISVVHSGNHWQ 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1611 220 SMART PB1_new 26 111 IPR000270 GO:0005515
Prci10g1611 220 CDD PB1_UP2 15 110 - -
Prci10g1611 220 Gene3D - 30 110 - -
Prci10g1611 220 SUPERFAMILY CAD & PB1 domains 28 116 - -
Prci10g1611 220 MobiDBLite consensus disorder prediction 115 145 - -
Prci10g1611 220 Pfam PB1 domain 28 111 IPR000270 GO:0005515
Prci10g1611 220 PANTHER OS05G0427100 PROTEIN-RELATED 7 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1611 Prci-Chr10 11650296 11652101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1611 12 110 MAP Kinase Kinase Kinase AT5G57610 52.000 4.77e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1611 - - gmx:100815157 232.646