Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1596 ATGGATTTTGAGGAGCAAGATGAGGAACTCGGGATGGGGCCCGCCGGGAGTTACGACTCGATGGGGAACCCGACCCGGCTGAAAATGGCGAGTGGCGGAGAAGTGATGGTGGTCCAGGCCTCGAGGAATAGTAACAGCAAGGCGAGGTATAGAGAGTGCTTGAAGAACCACGCGGTGAGCATCGGAGGCCACGCGCTCGACGGCTGCGGTGAGTTCCTTCCGGCCGGAGTGGAAGGCACGATGGACGCCCTCAAATGCGGCTGTAACTGCCACCGTAATTTTCACCGCAAGGAGACGGACACGATCGGTATCGGAGTCGGGGACCCGTTTTTGTTGACCCACCACCCGCATCTCCACCAGCACCAGCCGCCTCAGTTCTCGCCGTATTACAGGACAGCGCCGGCGGGATATTTGCACTTGGGAGGACCGCAGAGGGGGGCAACGCTGGCGCTGCCGTCGACGTCGGGAGCAGGGTGCGGGACCCAGAGCACGAGGGACGATCAAGAGGACGTTTCGAATCCAAGTGCAGGAGGAGGTGGAGGAGGGGACGGGTCGAAGAAGAGGTTCAGGACGAAATTCTCGCAGGAGCAAAAAGACAAAATGCTGGCCTTGGCTGAGAGTCTGGGTTGGAGGATTCAGAAGCACGACGAGGCTGTGGTCCAGCAGTTCTGTAACGAGACGGGCGTGAAGCGTCACGTTCTCAAGGTTTGGATGCATAACAACAAGCACACTCTTGGTAAGAAGCCCTAG 750 0.5893 MDFEEQDEELGMGPAGSYDSMGNPTRLKMASGGEVMVVQASRNSNSKARYRECLKNHAVSIGGHALDGCGEFLPAGVEGTMDALKCAXCNCHRNFHRKETDTIGIGVGDPFLLTHHPHLHQHQPPQFSPYYRTAPAGYLHLGGPQRGATLALPSTSGAGCGTQSTRDDQEDVSNPSAGGGGGGDGSKKRFRTKFSQEQKDKMLALAESLGWRIQKHDEAVVQQFCNETGVKRHVLKVWMHNNKHTLGKKP 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1596 250 MobiDBLite consensus disorder prediction 142 193 - -
Prci10g1596 250 Gene3D - 172 248 - -
Prci10g1596 250 MobiDBLite consensus disorder prediction 149 172 - -
Prci10g1596 250 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 41 246 - -
Prci10g1596 250 MobiDBLite consensus disorder prediction 1 27 - -
Prci10g1596 250 NCBIfam homeobox domain, ZF-HD class 187 243 IPR006455 -
Prci10g1596 250 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 50 99 IPR006456 -
Prci10g1596 250 FunFam Zinc-finger homeodomain protein 2 179 248 - -
Prci10g1596 250 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 49 99 IPR006456 -
Prci10g1596 250 SUPERFAMILY Homeodomain-like 173 248 IPR009057 -
Prci10g1596 250 Pfam ZF-HD protein dimerisation region 48 100 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1596 Prci-Chr10 11458798 11460629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1596 1 246 ZF-HD Transcription Factor Family AT4G24660 49.398 3.20e-72 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Prci10g1596 ZF-HD_dimer 1.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1596 - - qsa:O6P43_025228 361.688