Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1593 ATGGCAGACAACGTGGACCCTGCGACTTCAAACCTTCTGTGTTTGGAAAACAGTAATACGTGCTTTGACAATTCCGAATGTAATACCGGGGATGAGTTTGGAATTTCTTTTAACCAACAAAACGATAGCGGACGCCATCATAGTCCACCTTGGGATAGCCATGGATCCGGGTCCTTCGTGTGTTTTCCGATACAGAGTGACGAAAGAGTCAGGCTAATGGTTAAGAGGGAGAAAGAGCATTTGCCCAGAAGTGATTACCTGGAGAGGCTGCGTAGTGGAGACCTGGAGTTGAGTGTTAGGAGAGCGGCTCTTGATTGGATTTTGAAGGCACATGCCTATTATGGTTTTAGTCCATTGAGCTTTTGTCTATCTATGAACTACTTGGATCGCTTCCTATCATTATATGAGTTGCCTAGAGAAAAATCTTGGACCGTGCAATTGCTAGCTGTGGCTTGTTTGTCATTGGCAGCTAAAATGGAGGAAATTGAAGTACCTCTCTTAGTAGATTTACAGGTTGGAGAACCAAAGTTTGTATTTGAAGCAAAAACCATTGAAAGAATGGAGCTACTAGTGTTAAGCACATTGAGATGGAAAATGCAGGCTTTAACTCCTTGTTCCTTCATAGACTACTTCCTCAGTAAACTCACAACTGGGAAGCATCCAAGTAATTCATCCATTTCAAGATCAATACAGCTCGTAGTTGGCACAGTTAGGGGTATTGACTTCTTGGATTTCATGCCATCTGAAATTGCTGCAGCAGTGGCCATTTCTGTTACAAAGGAACTGCAAACAATCGAGATTGACAAGGTCATCTCTGGGTTAATGATGGAGGAAAAGAGAGTCCTCAAGTGTCTTGAACTGATAAGAGATTTGTCCTTGATGAGTGTTTCTGCAAGTTTGAGCAGAAACTTGATGCCATTGGTGCCCCAAAGCCCAGACGGGGTGCTGGATGCTGCATGCTTGAGCTACAAAAGTGATGAATTAACTGTTGGGTCATATCAAAACTCTTCACACGATACTTGTAATGCTAAGAGGACCAGATCAGACAGACCTTCTTCTGATGGGACTTTCAAGTCATAA 1080 0.4296 MADNVDPATSNLLCLENSNTCFDNSECNTGDEFGISFNQQNDSGRHHSPPWDSHGSGSFVCFPIQSDERVRLMVKREKEHLPRSDYLERLRSGDLELSVRRAALDWILKAHAYYGFSPLSFCLSMNYLDRFLSLYELPREKSWTVQLLAVACLSLAAKMEEIEVPLLVDLQVGEPKFVFEAKTIERMELLVLSTLRWKMQALTPCSFIDYFLSKLTTGKHPSNSSISRSIQLVVGTVRGIDFLDFMPSEIAAAVAISVTKELQTIEIDKVISGLMMEEKRVLKCLELIRDLSLMSVSASLSRNLMPLVPQSPDGVLDAACLSYKSDELTVGSYQNSSHDTCNAKRTRSDRPSSDGTFKS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1593 359 Pfam Cyclin, C-terminal domain 203 299 IPR004367 -
Prci10g1593 359 FunFam D6-type cyclin 197 286 - -
Prci10g1593 359 SUPERFAMILY Cyclin-like 59 199 IPR036915 -
Prci10g1593 359 Pfam Cyclin, N-terminal domain 71 199 IPR006671 -
Prci10g1593 359 CDD CYCLIN_AtCycD-like_rpt2 203 288 - -
Prci10g1593 359 FunFam D2/4-type cyclin 83 196 - -
Prci10g1593 359 CDD CYCLIN_AtCycD-like_rpt1 99 197 - -
Prci10g1593 359 ProSitePatterns Cyclins signature. 100 131 IPR006671 -
Prci10g1593 359 Gene3D - 73 285 - -
Prci10g1593 359 MobiDBLite consensus disorder prediction 342 359 - -
Prci10g1593 359 MobiDBLite consensus disorder prediction 333 359 - -
Prci10g1593 359 SMART cyclin_7 105 193 IPR013763 -
Prci10g1593 359 Gene3D - 83 200 - -
Prci10g1593 359 PANTHER CYCLINS 69 289 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1593 Prci-Chr10 11442918 11445567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1593 65 268 Core Cell Cycle Gene Families AT5G65420 61.165 6.50e-90 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1593 K18810 - cave:132187387 453.366