Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1567 ATGAAGCCCTCCTGGAAATCAAAAGGTGCCATAAGCGGATTGTTCTATATTCATCAGCATAAGCCAGACTTCTGCGAACTGTTCATCTTATGTGGAGGGAAACAAGTATTCATGAGAGGATCACGGAACGATGAAAAGATCATGGAGGACGATAATGGGTTCGTGGTTGCTAGAATGAGAGACAAGATAACGTTCAAAGATTGGTTAGAGAAAGTGTTGCCTGAGGGAAAGGTGGATTCCCCTGCAGATTCTAGAAGCCGTCGTGGATTAGCAGCGAGTATGGAATCCCCAGGTTCACAGAACCAGTGGGAATTCTATCGCCAAGAAATTGAAACTTATTTCCAGGATTTGTTGTCTTCTAACACGAATGAACAAACTAGCCTTGAGCATCCAGACAGTGACGTCTCGAGGATTAGTGCAAATGAACCAGATGATGTCATTGAACAGAACAATTCTAATCTGAGGGGAGGGGAAAAAATTGAGACGCTGACGAGAAAACTGGAGGAGGCGCATAAGATGATCCAATTGAAGAGGAAAGAAGCAAAAGAGCACTGTGATAGACGTGCAAAAGCTGAATGGGCCGTTTGTTTATGCAACTCTCGGGCTCAGGAACTTGAAAGCAAAATAAAGGAAGAAATCGGCATGAAGGAGGAGCTGGCCAAAGAATTGGAAGCCGAGAAAGAAATTACATTCGAAACCAGACGTGATATTGAGGAAAGCGGGAAAAGGTTGAGCTCGCTGCTGGAGCTTCAATCGGAGCTCTCAAACAAGCTTCAGATCTCCACACAGGCAAGGTCAGAAGCCGAAATCCAATTGGAGAATGCAGCGAACTCCAGGTCGGAGATGGTGGCTGAGATAGACGAGCTCAGGAGACAAAGAGACGTGCTTTACAGAAGGATAGAGTTCTGTAAAGAAAAGGACGCCATAGGAATGGCGGCCAGGCTGACTGAACCCAGTTTCAGTTTCAGAGAGTACACGACCCACGAGATCAGGTTGGCCACCGACGACTTCTCCGACCGCCTCCTGTTGAAGTCCGGTGGCGCCGACTGGACCGACGTCTATAGAGGAAAAATCAACCATTCCACAGTAGCCATCAAGATGCTCACTTCCACCCATGTCTTGTCCCCACAAGAATTCCAAGCTAAGGTGAGACTACTGGGTAGCATTCGACATCCTCACGTGGTGGCTATGGTGGGGTTCTGCACCGAGCTCAAATGCGTAGTTCTAGAATATATGAACAATGGGAGCCTGAGGGACATGCTATTTTCCAGAAGAAGAAACCGGGCCTTGGGTTGGCAAGACCGAATTAGGATAGCCGCAGAAGTTTGCTCGGGCCTGGCCTTTCTTCACTCGGCCCAGCCCATGCCCTTCGTTCATGGCCACTTAACTCCTTCCAGTATCCTCCTTGATCGCAATCTAGTTGCAAAAATCAAAGGCTTTGGGTCTAAAGAAGGCAGCCTAGAAGCAGACGTAAGGGCCTTCGGAGTCTTGATCATGCATCTCTTGACAGGAAGAAACTGGGTGGGTCTCGTTGAGGGCGAGGTGATGATGGGAGAAGATTTGGTTAAAGTTTTGGATGAGACAGCTGGGCCGTGGCCCATGAAAGTAGCCCAAAAGCTAGCAGGGCTAGCCGCGAAGTGTATGGGCTTTCCCAATGGGCCTCAGCCCAAGGAAGGATTGTGCATGGGAAATGCAATGATGGAACTAAATGAGATCAGAAGAGAGGCAAATCACGAAGTTGCAAGAGGAGACACGACGAGATTCACCGGAAGTGTAGATAGGGAAGATCTGATGGATGTGCCCAATGTTTTTCTTTGTCCCATACTTCAGGAGGTAATGAAGAACCCACACGTGGCAGCAGATGGGTTTTCATATGAATTAGAAGCAATAGAAGCATGGGTTGGTTCAGGGCATGATAGATCGCCAATGACAAATGCAAGACTAGCTCACTTGTTCTTTACCCCTAATCACTCTCTTCGCTCCTTAATTCGGGACTGGCAAACCAAAAGATCTTCTAAATTTGCAAATTAG 2031 0.4756 MKPSWKSKGAISGLFYIHQHKPDFCELFILCGGKQVFMRGSRNDEKIMEDDNGFVVARMRDKITFKDWLEKVLPEGKVDSPADSRSRRGLAASMESPGSQNQWEFYRQEIETYFQDLLSSNTNEQTSLEHPDSDVSRISANEPDDVIEQNNSNLRGGEKIETLTRKLEEAHKMIQLKRKEAKEHCDRRAKAEWAVCLCNSRAQELESKIKEEIGMKEELAKELEAEKEITFETRRDIEESGKRLSSLLELQSELSNKLQISTQARSEAEIQLENAANSRSEMVAEIDELRRQRDVLYRRIEFCKEKDAIGMAARLTEPSFSFREYTTHEIRLATDDFSDRLLLKSGGADWTDVYRGKINHSTVAIKMLTSTHVLSPQEFQAKVRLLGSIRHPHVVAMVGFCTELKCVVLEYMNNGSLRDMLFSRRRNRALGWQDRIRIAAEVCSGLAFLHSAQPMPFVHGHLTPSSILLDRNLVAKIKGFGSKEGSLEADVRAFGVLIMHLLTGRNWVGLVEGEVMMGEDLVKVLDETAGPWPMKVAQKLAGLAAKCMGFPNGPQPKEGLCMGNAMMELNEIRREANHEVARGDTTRFTGSVDREDLMDVPNVFLCPILQEVMKNPHVAADGFSYELEAIEAWVGSGHDRSPMTNARLAHLFFTPNHSLRSLIRDWQTKRSSKFAN 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1567 676 Gene3D Transferase(Phosphotransferase) domain 1 418 555 - -
Prci10g1567 676 MobiDBLite consensus disorder prediction 122 153 - -
Prci10g1567 676 ProSiteProfiles Protein kinase domain profile. 339 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1567 676 Coils Coil 265 306 - -
Prci10g1567 676 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 598 675 IPR013083 -
Prci10g1567 676 Coils Coil 160 180 - -
Prci10g1567 676 SMART Ubox_2 603 666 IPR003613 GO:0004842|GO:0016567
Prci10g1567 676 MobiDBLite consensus disorder prediction 76 98 - -
Prci10g1567 676 CDD RING-Ubox_WDSUB1-like 601 656 - -
Prci10g1567 676 Gene3D Phosphorylase Kinase; domain 1 312 411 - -
Prci10g1567 676 PANTHER OS02G0152300 PROTEIN 15 664 - -
Prci10g1567 676 Pfam Protein tyrosine and serine/threonine kinase 349 481 IPR001245 GO:0004672|GO:0006468
Prci10g1567 676 ProSiteProfiles U-box domain profile. 599 673 IPR003613 GO:0004842|GO:0016567
Prci10g1567 676 SUPERFAMILY Protein kinase-like (PK-like) 318 548 IPR011009 -
Prci10g1567 676 Pfam U-box domain 600 670 IPR003613 GO:0004842|GO:0016567
Prci10g1567 676 Coils Coil 202 240 - -
Prci10g1567 676 SUPERFAMILY RING/U-box 594 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1567 Prci-Chr10 11067257 11072121 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1567 10 673 U-box Gene Family AT5G65500 44.970 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Prci10g1567 PK_Tyr_Ser-Thr 3.8e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1567 - - pcin:129299872 1339.71