Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1562 ATGGAATCATTAGACAAGCACAGAAGAGAGTTTTCCGGCGACGACGAGGCGTCGCCAAGAGGAATTCTGGAAATCCCTGTTTCGGGGACAGAGTCAGATCACAGCGGAAGCAGCAACTGCAGCTTAAGCTCGCCGGAGAAGTCATCGGAGGCGGAGAGAGGGAGGGTGAGGGAAGGGGTGGGACATGGACAGCCATGGAAGGCGATAATAGAGTCATTGAAGAAGAAGTCGGTGCAGAGAATATCGGCGATTTCATTACTGGCGGCGAGCTACGAGATGTCAAGGAAGAGCTTGAGGAAGAGAAGGATGGAACGTATTCGAAGCGCAGAAGAAAGAATTAACGTGGGAGAGATCCCTACGAAAACTTCATGGAGGAACTTCGATTATGCAGAGCTCCAAGCTGCAACAGACGATTTCAATCCTGAGAACCTGATTGGGCAAGGTGGGCATGCTGAAGTCTACAAAGGACGCTTACCTGACGGTCAACTTGTGGCAGTGAAGAGGCTCATGAAGAAAGAGAAGCAAAATGAGGACAGAGCGGGTGATTACTTATCAGAGTTGGGAATTATTGCCCACATAAACCACCCAAATGCTGTGCGCTTGATTGGGTTCGGGGTCAACAATGGTTTCTACTTTGTCTTGCAATTAGCCTCAAATGGAAGCCTTTCTTCTCTGCTCTTTGGTTCTGAATGCTTGGAGTGGAAGATAAGGTTTAAGGTTGCTATTGGTGTGGCACAGGGCTTGCGATACCTGCATCATGATTGTCAAAGACGAATCATACACAGAGACATCAAGGCCTCCAACATATTACTAAACGAAAATTACGAAGCTGAGATTTCAGACTTTGGACTCGCGAAATGGCTCCCAGAGAAGTGGACTCACCATGTCGTCTTCCCCATAGAAGGCACATTTGGGTATTTGGCTCCAGAGTATTTTATGCATGGAATTGTGGATGAGAAGACTGATGTATTCGCCTTTGGAGTTTTGCTGCTGGAGCTCATTACAGGTCGTCGTGCAGTTGATTCATGCAGCAAGCAAAGTCTTGTCCTCTGGGCAAAACCACGACTAGAAGCACACAATGTGAAGGAATTAGTAGACCCTCGATTAGGAGAAGCTTATGATTCCATTGAATTGAAGCGGACCATGGTTACTGCTTCCATGTGTCTCCACCACTCATCCCCACACCGTCCGTACATGAAACAGGTTGTGCAGCTGCTGAAGGGCGAAGAGGGACTTGCTGATATGAAGCAGAAATCAGTATCAACAAGATCTCTCTTGCTAGATGCCAGTGACCTAGAAGAATATACTTGCTCAACTTACTTGAACGATCTTAATCGTTACAGGCAACTAGCGATGGAGTCAGCCAATGTCACTAGCCTCAGTCTCAGTTGA 1392 0.4734 MESLDKHRREFSGDDEASPRGILEIPVSGTESDHSGSSNCSLSSPEKSSEAERGRVREGVGHGQPWKAIIESLKKKSVQRISAISLLAASYEMSRKSLRKRRMERIRSAEERINVGEIPTKTSWRNFDYAELQAATDDFNPENLIGQGGHAEVYKGRLPDGQLVAVKRLMKKEKQNEDRAGDYLSELGIIAHINHPNAVRLIGFGVNNGFYFVLQLASNGSLSSLLFGSECLEWKIRFKVAIGVAQGLRYLHHDCQRRIIHRDIKASNILLNENYEAEISDFGLAKWLPEKWTHHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSCSKQSLVLWAKPRLEAHNVKELVDPRLGEAYDSIELKRTMVTASMCLHHSSPHRPYMKQVVQLLKGEEGLADMKQKSVSTRSLLLDASDLEEYTCSTYLNDLNRYRQLAMESANVTSLSLS 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1562 463 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 218 420 - -
Prci10g1562 463 MobiDBLite consensus disorder prediction 30 47 - -
Prci10g1562 463 MobiDBLite consensus disorder prediction 1 61 - -
Prci10g1562 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Prci10g1562 463 Pfam Protein kinase domain 142 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1562 463 SUPERFAMILY Protein kinase-like (PK-like) 120 406 IPR011009 -
Prci10g1562 463 ProSitePatterns Protein kinases ATP-binding region signature. 145 167 IPR017441 GO:0005524
Prci10g1562 463 Gene3D Phosphorylase Kinase; domain 1 110 214 - -
Prci10g1562 463 SMART serkin_6 139 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1562 463 MobiDBLite consensus disorder prediction 1 17 - -
Prci10g1562 463 PANTHER OS08G0249100 PROTEIN 12 420 IPR046958 -
Prci10g1562 463 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 116 216 - -
Prci10g1562 463 Gene3D Transferase(Phosphotransferase) domain 1 217 426 - -
Prci10g1562 463 ProSiteProfiles Protein kinase domain profile. 139 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1562 Prci-Chr10 11009938 11015037 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1562 126 452 Trihelix Transcription Factor Family AT1G70460 41.543 9.47e-73 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Prci10g1562 Pkinase 1.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1562 - - pcin:129295504 890.952