Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1561 ATGGAATCATTAGACAAGCACAGAAGAGAGTTTTCCGGCGACGACGAGGCGTCGCCAAGAGGAATTCTGGAAATCCCTGTTTCGGGGACAGAGTCAGATCACAGCGGAAGCAGCAACTGCAGCTTAAGCTCGCCGGAGAAGTCATCGGAGGCGGAGAGAGGGAGGGTGAGGGAAGGGGTGGGACATGGACAGCCATGGAAGGCGATAATAGAGTCATTGAAGAAGAAGTCGGTGCAGAGAATATCGGCGATTTCATTACTGGCGGCGAGCTACGAGATGTCAAGGAAGAGCTTGAGGAAGAGAAGGATGGAACGTATTCGAAGCGCAGAAGAAAGAATTAACGTGGGAGAGATCCCTACGAAAACTTCATGGAGGAACTTCGATTATGCAGAGCTCCAAGCTGCAACAGACGATTTCAATCCTGAGAACCTGATTGGGCAAGGTGGGCATGCTGAAGTCTACAAAGGACGCTTACCTGACGGTCAACTTGTGGCAGTGAAGAGGCTCATGAAGAAAGAGAAGCAAAATGAGGACAGAGCGGGTGATTACTTATCAGAGTTGGGAATTATTGCCCACATAAACCACCCAAATGCTGTGCGCTTGATTGGGTTCGGGGTCAACAATGGTTTCTACTTTGTCTTGCAATTAGCCTCAAATGGAAGCCTTTCTTCTCTGCTCTTTGGTTCTCCCTCAATCTCTTCCTTCTCCTACCTACAACTGCTTTTCCTGGGCTTGCGATACCTGCATCATGATTGTCAAAGACGAATCATACACAGAGACATCAAGGCCTCCAACATATTACTAAACGAAAATTACGAAGCTGAGATTTCAGACTTTGGACTCGCGAAATGGCTCCCAGAGAAGTGGACTCACCATGTCGTCTTCCCCATAGAAGGCACATTTGGGTATTTGGCTCCAGAGTATTTTATGCATGGAATTGTGGATGAGAAGACTGATGTATTCGCCTTTGGAGTTTTGCTGCTGGAGCTCATTACAGGTCGTCGTGCAGTTGATTCATGCAGCAAGCAAAGTCTTGTCCTCTGGGCAAAACCACGACTAGAAGCACACAATGTGAAGGAATTAGTAGACCCTCGATTAGGAGAAGCTTATGATTCCATTGAATTGAAGCGGACCATGGTTACTGCTTCCATGTGTCTCCACCACTCATCCCCACACCGTCCGTACATGAAACAGGTTGTGCAGCTGCTGAAGGGCGAAGAGGGACTTGCTGATATGAAGCAGAAATCAGTATCAACAAGATCTCTCTTGCTAGATGCCAGTGACCTAGAAGAATATACTTGCTCAACTTACTTGAACGATCTTAATCGTTACAGGCAACTAGCGATGGAGTCAGCCAATGTCACTAGCCTCAGTCTCAGTTGA 1383 0.4743 MESLDKHRREFSGDDEASPRGILEIPVSGTESDHSGSSNCSLSSPEKSSEAERGRVREGVGHGQPWKAIIESLKKKSVQRISAISLLAASYEMSRKSLRKRRMERIRSAEERINVGEIPTKTSWRNFDYAELQAATDDFNPENLIGQGGHAEVYKGRLPDGQLVAVKRLMKKEKQNEDRAGDYLSELGIIAHINHPNAVRLIGFGVNNGFYFVLQLASNGSLSSLLFGSPSISSFSYLQLLFLGLRYLHHDCQRRIIHRDIKASNILLNENYEAEISDFGLAKWLPEKWTHHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSCSKQSLVLWAKPRLEAHNVKELVDPRLGEAYDSIELKRTMVTASMCLHHSSPHRPYMKQVVQLLKGEEGLADMKQKSVSTRSLLLDASDLEEYTCSTYLNDLNRYRQLAMESANVTSLSLS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1561 460 Pfam Protein kinase domain 142 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1561 460 SUPERFAMILY Protein kinase-like (PK-like) 120 403 IPR011009 -
Prci10g1561 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Prci10g1561 460 MobiDBLite consensus disorder prediction 30 47 - -
Prci10g1561 460 MobiDBLite consensus disorder prediction 1 61 - -
Prci10g1561 460 SMART serkin_6 139 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1561 460 PANTHER OS08G0249100 PROTEIN 12 417 IPR046958 -
Prci10g1561 460 ProSitePatterns Protein kinases ATP-binding region signature. 145 167 IPR017441 GO:0005524
Prci10g1561 460 Gene3D Phosphorylase Kinase; domain 1 110 214 - -
Prci10g1561 460 ProSiteProfiles Protein kinase domain profile. 139 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1561 460 Gene3D Transferase(Phosphotransferase) domain 1 218 423 - -
Prci10g1561 460 MobiDBLite consensus disorder prediction 1 17 - -
Prci10g1561 460 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 116 216 - -
Prci10g1561 460 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 218 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1561 Prci-Chr10 11009938 11015037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1561 126 449 Trihelix Transcription Factor Family AT1G70460 39.466 4.12e-64 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Prci10g1561 Pkinase 2.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1561 - - pcin:129295504 838.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1561 10 11009938 11015037 Prci5g1836 5 36480951 36485537 CCT