Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1549 ATGGCAGTGCAATCAGATGCGGGGCATCCCAGGAAGGCCTTCGGATGGGCAGCTAGGAATCCATCTGACCTTCTCTCCCCTTTTCACTTCTCCAGAAGAGAGACAGGAGAAAAAGATGTGTCTTTCAAAGTGTTATATTGTGGGTTATGCCACTCTGACCTCCACATGATCAACAACGAACTCGGATTTTCCACCTACCCGCTTGTTCCTGGGCATGAGATGGTTGGCATGGTGACAGAGGTGGGAAGCAAGGTAGAAAAGTTCAAAGTTGGAGACAGGGTTGGTGCAGGAGGCATGGTTTGGTCTTGTGGCTCCTGTGAAAGTTGTGAAAATGATCTTGAGATTCACTGCTCAAAGATGGTCTTCACAATCGCCGGCAAGTACATCGACGGCACCACCACCTACGGAGGCTTTTCGGACTTGATGGTGGTGGATGAACACTTTGTGTTCCACATTCCAGATGCTTTACCTCTTGATGCTGCAGCTCCTCTGCTTTGTGCTGGAATCACAGTGTATAGCCCTCTGAGATACTATGATCTTGACAAGCCAGGCCTTCATGTGGGTGTGGTTGGTCTTGGTGGGCTTGGCCATATGGCCGTCAAGTTTGCAAAAGCCTTTGGAGCTAAGGTCACTGTCATCAGTACATCTCCCAACAAAAAGAAGGAAGCCATTGAACATCTAGGAGCTGACTCTTTCTTGATCAGCTGTGACGAAGATCAGATGCAGGCTGCAACGAGCACTTTGGATGGTATTATTGACACAGTTTCTGCAGAACATGCTGTGTTGCCTTTGATTGGATTGTTGAAGCCTAATGGGAAACTTGTATTCCTTGGAGTTCCAGATAAGCCCCTAGAGCTACCAGTATTCCCTTTAGTGGTGGCGAGAAAGACAGTAGCTGGAAGTAATGCTGGAGGAGTGAAGGAGGTGCTAGAAATGCTTGAATTTGCTGCAAAACACGACATAAAAGCTGATGTAGAGGTTATTCCTATGAATTACGTGAACACAGCAATAGAGCGTCTCCTGAAAGCTGATGTCAAATATCGATTTGTGATTGATATTGGAAACACGTTGAGAAGTGAAGCTCTTTGA 1089 0.4674 MAVQSDAGHPRKAFGWAARNPSDLLSPFHFSRRETGEKDVSFKVLYCGLCHSDLHMINNELGFSTYPLVPGHEMVGMVTEVGSKVEKFKVGDRVGAGGMVWSCGSCESCENDLEIHCSKMVFTIAGKYIDGTTTYGGFSDLMVVDEHFVFHIPDALPLDAAAPLLCAGITVYSPLRYYDLDKPGLHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKKEAIEHLGADSFLISCDEDQMQAATSTLDGIIDTVSAEHAVLPLIGLLKPNGKLVFLGVPDKPLELPVFPLVVARKTVAGSNAGGVKEVLEMLEFAAKHDIKADVEVIPMNYVNTAIERLLKADVKYRFVIDIGNTLRSEAL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1549 362 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 322 IPR036291 -
Prci10g1549 362 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Prci10g1549 362 Gene3D - 16 353 - -
Prci10g1549 362 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Prci10g1549 362 CDD CAD1 14 352 IPR047109 GO:0016616
Prci10g1549 362 FunFam Uncharacterized protein 16 166 - -
Prci10g1549 362 SUPERFAMILY GroES-like 19 184 IPR011032 -
Prci10g1549 362 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Prci10g1549 362 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Prci10g1549 362 PANTHER ALDEHYDE REDUCTASE 8 356 IPR047109 GO:0016616
Prci10g1549 362 FunFam Putative cinnamyl alcohol dehydrogenase 6 324 353 - -
Prci10g1549 362 Gene3D - 167 323 - -
Prci10g1549 362 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1549 Prci-Chr10 10792510 10795155 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1549 11 358 Monolignol Biosynthesis Gene Families AT4G37990 65.805 6.04e-155 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1549 K23232 - mnt:21385910 535.028