Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1548 ATGGCAGTGCAATCAGATGCGGGGCATCCCAGGAAGGCCTTCGGATGGGCAGCTAGGAATCCATCTGACCTTCTCTCCCCTTTTCACTTCTCCAGAAGGCATGAGATGGTTGGCATGGTGACAGAGGTGGGAAGCAAGGTAGAAAAGTTCAAAGTTGGAGACAGGGTTGGTGCAGGAGGCATGGTTTGGTCTTGTGGCTCCTGTGAAAGTTGTGAAAATGATCTTGAGATTCACTGCTCAAAGATGGTCTTCACAATCGCCGGCAAGTACATCGACGGCACCACCACCTACGGAGGCTTTTCGGACTTGATGGTGGTGGATGAACACTTTGTGTTCCACATTCCAGATGCTTTACCTCTTGATGCTGCAGCTCCTCTGCTTTGTGCTGGAATCACAGTGTATAGCCCTCTGAGATACTATGATCTTGACAAGCCAGGCCTTCATGTGGGTGTGGTTGGTCTTGGTGGGCTTGGCCATATGGCCGTCAAGTTTGCAAAAGCCTTTGGAGCTAAGGTCACTGTCATCAGTACATCTCCCAACAAAAAGAAGGAAGCCATTGAACATCTAGGAGCTGACTCTTTCTTGATCAGCTGTGACGAAGATCAGATGCAGGCTGCAACGAGCACTTTGGATGGTATTATTGACACAGTTTCTGCAGAACATGCTGTGTTGCCTTTGATTGGATTGTTGAAGCCTAATGGGAAACTTGTATTCCTTGGAGTTCCAGATAAGCCCCTAGAGCTACCAGTATTCCCTTTAGTGGTGGCGAGAAAGACAGTAGCTGGAAGTAATGCTGGAGGAGTGAAGGAGGTGCTAGAAATGCTTGAATTTGCTGCAAAACACGACATAAAAGCTGATGTAGAGGTTATTCCTATGAATTACGTGAACACAGCAATAGAGCGTCTCCTGAAAGCTGATGTCAAATATCGATTTGTGATTGATATTGGAAACACGTTGAGAAGTGAAGCTCTTTGA 975 0.4697 MAVQSDAGHPRKAFGWAARNPSDLLSPFHFSRRHEMVGMVTEVGSKVEKFKVGDRVGAGGMVWSCGSCESCENDLEIHCSKMVFTIAGKYIDGTTTYGGFSDLMVVDEHFVFHIPDALPLDAAAPLLCAGITVYSPLRYYDLDKPGLHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKKEAIEHLGADSFLISCDEDQMQAATSTLDGIIDTVSAEHAVLPLIGLLKPNGKLVFLGVPDKPLELPVFPLVVARKTVAGSNAGGVKEVLEMLEFAAKHDIKADVEVIPMNYVNTAIERLLKADVKYRFVIDIGNTLRSEAL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1548 324 PANTHER ALDEHYDE REDUCTASE 34 318 IPR047109 GO:0016616
Prci10g1548 324 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 118 284 IPR036291 -
Prci10g1548 324 FunFam Cinnamyl alcohol dehydrogenase 129 285 - -
Prci10g1548 324 Pfam Alcohol dehydrogenase GroES-like domain 33 113 IPR013154 -
Prci10g1548 324 SUPERFAMILY GroES-like 26 146 IPR011032 -
Prci10g1548 324 Gene3D - 129 285 - -
Prci10g1548 324 FunFam Putative cinnamyl alcohol dehydrogenase 6 286 315 - -
Prci10g1548 324 Gene3D - 33 315 - -
Prci10g1548 324 Pfam Zinc-binding dehydrogenase 156 279 IPR013149 -
Prci10g1548 324 CDD CAD1 14 314 IPR047109 GO:0016616
Prci10g1548 324 SMART PKS_ER_names_mod 9 313 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1548 Prci-Chr10 10792508 10795158 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1548 12 323 Monolignol Biosynthesis Gene Families AT2G21890 54.131 7.34e-123 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1548 K23232 - mnt:21385910 445.662