Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1547 ATGCGGGGCATCCCAGGAAGGCCTTCGGATGGGCAGCTAGGAATCCATCTGACCTTCTCTCCCCTTTTCACTTCTCCAGAAGGAGAAAAAGATGTGTCTTTCAAAGTGTTATATTGTGGGTTATGCCACTCTGACCTCCACATGATCAACAACGAACTCGGATTTTCCACCTACCCGCTTGTTCCTGGGCATGAGATGGTTGGCATGGTGACAGAGGTGGGAAGCAAGGTAGAAAAGTTCAAAGTTGGAGACAGGGTTGGTGCAGGAGGCATGGTTTGGTCTTGTGGCTCCTGTGAAAGTTGTGAAAATGATCTTGAGATTCACTGCTCAAAGATGGTCTTCACAATCGCCGGCAAGTACATCGACGGCACCACCACCTACGGAGGCTTTTCGGACTTGATGGTGGTGGATGAACACTTTGTGTTCCACATTCCAGATGCTTTACCTCTTGATGCTGCAGCTCCTCTGCTTTGTGCTGGAATCACAGTGTATAGCCCTCTGAGATACTATGATCTTGACAAGCCAGGCCTTCATGTGGGTGTGGTTGGTCTTGGTGGGCTTGGCCATATGGCCGTCAAGTTTGCAAAAGCCTTTGGAGCTAAGGTCACTGTCATCAGTACATCTCCCAACAAAAAGAAGGAAGCCATTGAACATCTAGGAGCTGACTCTTTCTTGATCAGCTGTGACGAAGATCAGATGCAGGCTGCAACGAGCACTTTGGATGGTATTATTGACACAGTTTCTGCAGAACATGCTGTGTTGCCTTTGATTGGATTGTTGAAGCCTAATGGGAAACTTGTATTCCTTGGAGTTCCAGATAAGCCCCTAGAGCTACCAGTATTCCCTTTAGTGGTGGCGAGAAAGACAGTAGCTGGAAGTAATGCTGGAGGAGTGAAGGAGGTGCTAGAAATGCTTGAATTTGCTGCAAAACACGACATAAAAGCTGATGTAGAGGTTATTCCTATGAATTACGTGAACACAGCAATAGAGCGTCTCCTGAAAGCTGATGTCAAATATCGATTTGTGATTGATATTGGAAACACGTTGAGAAGTGAAGCTCTTTGA 1065 0.4667 MRGIPGRPSDGQLGIHLTFSPLFTSPEGEKDVSFKVLYCGLCHSDLHMINNELGFSTYPLVPGHEMVGMVTEVGSKVEKFKVGDRVGAGGMVWSCGSCESCENDLEIHCSKMVFTIAGKYIDGTTTYGGFSDLMVVDEHFVFHIPDALPLDAAAPLLCAGITVYSPLRYYDLDKPGLHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKKEAIEHLGADSFLISCDEDQMQAATSTLDGIIDTVSAEHAVLPLIGLLKPNGKLVFLGVPDKPLELPVFPLVVARKTVAGSNAGGVKEVLEMLEFAAKHDIKADVEVIPMNYVNTAIERLLKADVKYRFVIDIGNTLRSEAL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1547 354 FunFam Putative cinnamyl alcohol dehydrogenase 6 316 345 - -
Prci10g1547 354 SMART PKS_ER_names_mod 14 343 IPR020843 GO:0016491
Prci10g1547 354 Pfam Zinc-binding dehydrogenase 186 309 IPR013149 -
Prci10g1547 354 SUPERFAMILY GroES-like 27 176 IPR011032 -
Prci10g1547 354 CDD CAD1 26 344 IPR047109 GO:0016616
Prci10g1547 354 Pfam Alcohol dehydrogenase GroES-like domain 30 143 IPR013154 -
Prci10g1547 354 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 148 314 IPR036291 -
Prci10g1547 354 PANTHER ALDEHYDE REDUCTASE 26 348 IPR047109 GO:0016616
Prci10g1547 354 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 63 77 IPR002328 GO:0008270|GO:0016491
Prci10g1547 354 Gene3D - 159 315 - -
Prci10g1547 354 FunFam Cinnamyl alcohol dehydrogenase 159 315 - -
Prci10g1547 354 Gene3D - 26 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1547 Prci-Chr10 10792507 10795158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1547 19 350 Monolignol Biosynthesis Gene Families AT4G37990 65.569 2.60e-142 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1547 K23232 - pvy:116143840 486.493