Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1531 ATGGAGGAATTGGATAACCACAGTTTAAGACTTGTTATGGTTTACATCCTTTGCTTTCTCCTGTTTATCGGATCAGCTTCTGCAAGTGAAGGTGTAGTAGAGAAACCACCTCAGGACATGGAATTACTTGAAGGAATTTTCAGAGCTAAGAAGAATTATATAGATTTCTGCTTAGTGAAAGACGAGGGAAGTCCATACATTTCACTGATTGAACTGAGGCCACTGGATGAAGAGTACCTACAGGATTCCCCTTCTAGTGCCCTGAAACTGATCGCAAGAAATAACCTAGAGGCCAACGGAGATGACATCAGGCACCCACTTGACAAAACTGACAGAATCTGGAAAGCTACTTCAAGTCCTTCATCTTCTCCCATAACATCATCCAATGCGAGCATTTCCAGTCACAATGCTAATTCGACACCTCCTCTTCAAGTCCTACGAACCGCTCTTACGCATCCTGAGAAACTGGAATTCATCCACAACGGCCTCGACCGTGGGAATTCCAAATACCGTGTGTTTCTCCACTTTCTTGAATTGAATAAGAGTGTCACACTAGGCAAAAGAGTGTTTGATATCTACGTAAACGGTGTCATCAAAGAGCCGAAGTTTGACATATTTGCTGGCGGATCGAACTATAGACAAGCTGTTTTGAACTTCTCGGCAAATGGTTCGCTGAATCTAACCTTGAGCAAGGCCTCTGGGTCTGAGAATGGACCGCTTTGTAATGCATACGAGATCCTGAAGTTTATCCCTTGGATGCAGGAGGCCAACCAAACAGACACGGAAGTGATGTTGAAGGTGAGAGAGCAATTGCTAGAGAATAACAGAGGAAATGAAGAACTGGAGCGTTGGAGTGGAGACCCATGCATACTGTTCCCTGGGCAACATGTAGTATGCGACCGTTTAGGTGGTCAACTTGTTATCACTAAACTGGATCTTTCGTCAAGTAATCTCCGAGGACCGATTCCTTCCAGTATCACTGAGTTGTCCAACTTGAGAATATTGAACCTGAGCTATAATAGCTTAACTGGGAACATTCCCTTATTTCCACATTCATCTTTGCTTACATCAATAGATCTGAGCCACAATGATCTCACAGGATCTCTTCCATGGAGCCTTCCCTTACTGCCACAACTAAAGTCCTTGTATTTTGGCTGCAATAAGCGCATGAACAAGGAGGTTCCAACTTCCTTGAACAGCTTAGCCAATACAGATTATGGAAGCTGTAAAGCTGGAGAAGCAGGAATTTCCCAAAAGCACATCATCATTGGAACCGTTACATGTGGATTGCTCCTGATTATTTTGGCTATTGGAATTCTTTTGGGTTGCAATAAAAGAGGAAAATTAGTCCCCTGGGGAACATCTGATGAAAAGGGATACCCAAGAACCACAAATTTGATTTTCTCTTTGAGCGGTAAAGATGATTTCATCTTTAAGTCGGTATCCATTCAAACATTCACCCTGGAATACATAGAGGCAGCCACCCAAAACTACAAAACTTTGATTGGTGAAGGAGGGTTTGGGTCTGTTTACCGTGGCACTCTAGAAGATGGCCAAGAAGTTGCAGTGAAGGTCCGTTCAGCCACATCAACTCAGGGAACTCGTGAGTTTGACAACGAGGTAAACTTGCTCTCTGCCATACGGCATGAGAACCTGGTGCCACTTATCGGTTACTGTTATGAAAGGGATCAACAAATTCTCGTGTATCCTTTCATGTCTAATGGTTCTTTACAAGATAGGCTTTATGGGGAACCCGCAAAGAGAAAACCATTAGACTGGCCAACCAGGTTATCTATTGCTCTTGGTGCAGGTCGAGGTTTGTCATATCTTCACACATTTTCGGGACGTTCTGTTATACACAGAGATGTGAAATCAAGCAATATTCTTCTGGATCACAGCATGTGTGCCAAGGTAGCAGACTTTGGTTTCTCAAAATATGCTCCCCAGGAAGGAGACAGTGGTGCTTCTCTTGAAGTAAGAGGAACGGCAGGATATATGGACCCTGAGTACTATACGACCCAGCAATTATCTGCAAAGAGTGATGTCTTTAGCTTTGGCATGGTTTTACTTGAAATTGTGAGTGGCCGGGAACCTCTCAACACGCAAAGACCACGGAATGAGTGGAACTTGGTGGAATGGGCTAAACCGTATATACGGGCGTCGAAGATCGATGAAATTGTGGATCCTAGCATCAAGGGAGGATATCATGCAGAGGCCATGTGGAGAGTAGTGGAAACAGCATTAGCGTGTATTGAACCATTCTCAGTACATCGACCAAGCATGGGTGATATTGTCCGTGAGTTGGAGGATGCTCTGATTATAGAAAACAATGCATCAGAATACATGAAGTCCATAGAAAGCCTTGGAGGATCAAATCGCAACTCCATTGTCATGGAGAAGAAGATGGCAGCCCCATCTCCATCAACAACAGAATCAGCCATCTCGCCCAAAACCTTGTCCCACCCACAGCCCAGATAG 2478 0.4415 MEELDNHSLRLVMVYILCFLLFIGSASASEGVVEKPPQDMELLEGIFRAKKNYIDFCLVKDEGSPYISLIELRPLDEEYLQDSPSSALKLIARNNLEANGDDIRHPLDKTDRIWKATSSPSSSPITSSNASISSHNANSTPPLQVLRTALTHPEKLEFIHNGLDRGNSKYRVFLHFLELNKSVTLGKRVFDIYVNGVIKEPKFDIFAGGSNYRQAVLNFSANGSLNLTLSKASGSENGPLCNAYEILKFIPWMQEANQTDTEVMLKVREQLLENNRGNEELERWSGDPCILFPGQHVVCDRLGGQLVITKLDLSSSNLRGPIPSSITELSNLRILNLSYNSLTGNIPLFPHSSLLTSIDLSHNDLTGSLPWSLPLLPQLKSLYFGCNKRMNKEVPTSLNSLANTDYGSCKAGEAGISQKHIIIGTVTCGLLLIILAIGILLGCNKRGKLVPWGTSDEKGYPRTTNLIFSLSGKDDFIFKSVSIQTFTLEYIEAATQNYKTLIGEGGFGSVYRGTLEDGQEVAVKVRSATSTQGTREFDNEVNLLSAIRHENLVPLIGYCYERDQQILVYPFMSNGSLQDRLYGEPAKRKPLDWPTRLSIALGAGRGLSYLHTFSGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSGASLEVRGTAGYMDPEYYTTQQLSAKSDVFSFGMVLLEIVSGREPLNTQRPRNEWNLVEWAKPYIRASKIDEIVDPSIKGGYHAEAMWRVVETALACIEPFSVHRPSMGDIVRELEDALIIENNASEYMKSIESLGGSNRNSIVMEKKMAAPSPSTTESAISPKTLSHPQPR 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1531 825 Pfam Leucine rich repeat 309 365 IPR001611 GO:0005515
Prci10g1531 825 Gene3D Phosphorylase Kinase; domain 1 468 571 - -
Prci10g1531 825 Gene3D - 96 249 - -
Prci10g1531 825 ProSiteProfiles Leucine-rich repeat profile. 331 353 IPR001611 GO:0005515
Prci10g1531 825 SMART serkin_6 498 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1531 825 SUPERFAMILY Protein kinase-like (PK-like) 477 768 IPR011009 -
Prci10g1531 825 Gene3D Ribonuclease Inhibitor 256 410 IPR032675 -
Prci10g1531 825 Gene3D Transferase(Phosphotransferase) domain 1 572 788 - -
Prci10g1531 825 Pfam Protein tyrosine and serine/threonine kinase 499 715 IPR001245 GO:0004672|GO:0006468
Prci10g1531 825 MobiDBLite consensus disorder prediction 799 825 - -
Prci10g1531 825 SUPERFAMILY L domain-like 293 402 - -
Prci10g1531 825 CDD STKc_IRAK 502 769 - -
Prci10g1531 825 FunFam Nodulation receptor kinase 462 571 - -
Prci10g1531 825 ProSiteProfiles Protein kinase domain profile. 496 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1531 825 MobiDBLite consensus disorder prediction 116 139 - -
Prci10g1531 825 Pfam Malectin-like domain 22 248 IPR024788 -
Prci10g1531 825 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 572 781 - -
Prci10g1531 825 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524
Prci10g1531 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Prci10g1531 825 MobiDBLite consensus disorder prediction 805 825 - -
Prci10g1531 825 PANTHER OS07G0107800 PROTEIN-RELATED 32 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1531 Prci-Chr10 10531134 10538081 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1531 44 775 Receptor kinase-like Gene Family AT1G67720 35.884 4.44e-124 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci10g1531 PK_Tyr_Ser-Thr 3.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1531 - - gmx:100781986 1071.23