Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1530 ATGGAGGAATTGGATAACCACAGTTTAAGACTTGTTATGGTTTACATCCTTTGCTTTCTCCTGTTTATCGGATCAGCTTCTGCAAGTGAAGATCCAAAGACCTCGGTAAATTACACATCAGATTTTAGTTTCTACCCAGATAAAACAAGTTGCTTAGACACAACCAAGCCTGTGGGGAACAACGCAGGCCGTGGAAAAGCTAGAGTTTTTTATATAGATGAAGGAAAAAGATGTTACAACTTGCCAACAGCTGAGAATCAAGTGTATCTGCTAAGGGGCACATTTCCATCTGATGAATCTCTAAGTAAATCTCCGAATTCCTCTTTTGATGTTACAATTGGGGTTACCTCATTAGGTGTAGTAGAGAAACCACCTCAGGACATGGAATTACTTGAAGGAATTTTCAGAGCTAAGAAGAATTATATAGATTTCTGCTTAGTGAAAGACGAGGGAAGTCCATACATTTCACTGATTGAACTGAGGCCACTGGATGAAGAGTACCTACAGGATTCCCCTTCTAGTGCCCTGAAACTGATCGCAAGAAATAACCTAGAGGCCAACGGAGATGACATCAGGCACCCACTTGACAAAACTGACAGAATCTGGAAAGCTACTTCAAGTCCTTCATCTTCTCCCATAACATCATCCAATGCGAGCATTTCCAGTCACAATGCTAATTCGACACCTCCTCTTCAAGTCCTACGAACCGCTCTTACGCATCCTGAGAAACTGGAATTCATCCACAACGGCCTCGACCGTGGGAATTCCAAATACCGTGTGTTTCTCCACTTTCTTGAATTGAATAAGAGTGTCACACTAGGCAAAAGAGTGTTTGATATCTACGTAAACGGTGTCATCAAAGAGCCGAAGTTTGACATATTTGCTGGCGGATCGAACTATAGACAAGCTGTTTTGAACTTCTCGGCAAATGGTTCGCTGAATCTAACCTTGAGCAAGGCCTCTGGGTCTGAGAATGGACCGCTTTGTAATGCATACGAGATCCTGAAGTTTATCCCTTGGATGCAGGAGGCCAACCAAACAGACACGGAAGTGATGTTGAAGGTGAGAGAGCAATTGCTAGAGAATAACAGAGGAAATGAAGAACTGGAGCGTTGGAGTGGAGACCCATGCATACTGTTCCCTGGGCAACATGTAGTATGCGACCGTTTAGGTGGTCAACTTGTTATCACTAAACTGGATCTTTCGTCAAGTAATCTCCGAGGACCGATTCCTTCCAGTATCACTGAGTTGTCCAACTTGAGAATATTGAACCTGAGCTATAATAGCTTAACTGGGAACATTCCCTTATTTCCACATTCATCTTTGCTTACATCAATAGATCTGAGCCACAATGATCTCACAGGATCTCTTCCATGGAGCCTTCCCTTACTGCCACAACTAAAGTCCTTGTATTTTGGCTGCAATAAGCGCATGAACAAGGAGGTTCCAACTTCCTTGAACAGCTTAGCCAATACAGATTATGGAAGCTGTAAAGCTGGAGAAGCAGGAATTTCCCAAAAGCACATCATCATTGGAACCGTTACATGTGGATTGCTCCTGATTATTTTGGCTATTGGAATTCTTTTGGGTTGCAATAAAAGAGGAAAATTAGTCCCCTGGGGAACATCTGATGAAAAGGGATACCCAAGAACCACAAATTTGATTTTCTCTTTGAGCGGTAAAGATGATTTCATCTTTAAGTCGGTATCCATTCAAACATTCACCCTGGAATACATAGAGGCAGCCACCCAAAACTACAAAACTTTGATTGGTGAAGGAGGGTTTGGGTCTGTTTACCGTGGCACTCTAGAAGATGGCCAAGAAGTTGCAGTGAAGGTCCGTTCAGCCACATCAACTCAGGGAACTCGTGAGTTTGACAACGAGGTAAACTTGCTCTCTGCCATACGGCATGAGAACCTGGTGCCACTTATCGGTTACTGTTATGAAAGGGATCAACAAATTCTCGTGTATCCTTTCATGTCTAATGGTTCTTTACAAGATAGGCTTTATGGGGAACCCGCAAAGAGAAAACCATTAGACTGGCCAACCAGGTTATCTATTGCTCTTGGTGCAGGTCGAGGTTTGTCATATCTTCACACATTTTCGGGACGTTCTGTTATACACAGAGATGTGAAATCAAGCAATATTCTTCTGGATCACAGCATGTGTGCCAAGGTAGCAGACTTTGGTTTCTCAAAATATGCTCCCCAGGAAGGAGACAGTGGTGCTTCTCTTGAAGTAAGAGGAACGGCAGGATATATGGACCCTGAGTACTATACGACCCAGCAATTATCTGCAAAGAGTGATGTCTTTAGCTTTGGCATGGTTTTACTTGAAATTGTGAGTGGCCGGGAACCTCTCAACACGCAAAGACCACGGAATGAGTGGAACTTGGTGGAATGGGCTAAACCGTATATACGGGCGTCGAAGATCGATGAAATTGTGGATCCTAGCATCAAGGGAGGATATCATGCAGAGGCCATGTGGAGAGTAGTGGAAACAGCATTAGCGTGTATTGAACCATTCTCAGTACATCGACCAAGCATGGGTGATATTGTCCGTGAGTTGGAGGATGCTCTGATTATAGAAAACAATGCATCAGAATACATGAAGTCCATAGAAAGCCTTGGAGGATCAAATCGCAACTCCATTGTCATGGAGAAGAAGATGGCAGCCCCATCTCCATCAACAACAGAATCAGCCATCTCGCCCAAAACCTTGTCCCACCCACAGCCCAGATAG 2742 0.4369 MEELDNHSLRLVMVYILCFLLFIGSASASEDPKTSVNYTSDFSFYPDKTSCLDTTKPVGNNAGRGKARVFYIDEGKRCYNLPTAENQVYLLRGTFPSDESLSKSPNSSFDVTIGVTSLGVVEKPPQDMELLEGIFRAKKNYIDFCLVKDEGSPYISLIELRPLDEEYLQDSPSSALKLIARNNLEANGDDIRHPLDKTDRIWKATSSPSSSPITSSNASISSHNANSTPPLQVLRTALTHPEKLEFIHNGLDRGNSKYRVFLHFLELNKSVTLGKRVFDIYVNGVIKEPKFDIFAGGSNYRQAVLNFSANGSLNLTLSKASGSENGPLCNAYEILKFIPWMQEANQTDTEVMLKVREQLLENNRGNEELERWSGDPCILFPGQHVVCDRLGGQLVITKLDLSSSNLRGPIPSSITELSNLRILNLSYNSLTGNIPLFPHSSLLTSIDLSHNDLTGSLPWSLPLLPQLKSLYFGCNKRMNKEVPTSLNSLANTDYGSCKAGEAGISQKHIIIGTVTCGLLLIILAIGILLGCNKRGKLVPWGTSDEKGYPRTTNLIFSLSGKDDFIFKSVSIQTFTLEYIEAATQNYKTLIGEGGFGSVYRGTLEDGQEVAVKVRSATSTQGTREFDNEVNLLSAIRHENLVPLIGYCYERDQQILVYPFMSNGSLQDRLYGEPAKRKPLDWPTRLSIALGAGRGLSYLHTFSGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSGASLEVRGTAGYMDPEYYTTQQLSAKSDVFSFGMVLLEIVSGREPLNTQRPRNEWNLVEWAKPYIRASKIDEIVDPSIKGGYHAEAMWRVVETALACIEPFSVHRPSMGDIVRELEDALIIENNASEYMKSIESLGGSNRNSIVMEKKMAAPSPSTTESAISPKTLSHPQPR 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1530 913 Gene3D Transferase(Phosphotransferase) domain 1 660 876 - -
Prci10g1530 913 ProSiteProfiles Protein kinase domain profile. 584 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1530 913 Gene3D Phosphorylase Kinase; domain 1 556 659 - -
Prci10g1530 913 PANTHER OS07G0107800 PROTEIN-RELATED 24 860 - -
Prci10g1530 913 MobiDBLite consensus disorder prediction 202 227 - -
Prci10g1530 913 ProSiteProfiles Leucine-rich repeat profile. 419 441 IPR001611 GO:0005515
Prci10g1530 913 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 660 869 - -
Prci10g1530 913 FunFam Nodulation receptor kinase 550 659 - -
Prci10g1530 913 SUPERFAMILY L domain-like 381 490 - -
Prci10g1530 913 SMART serkin_6 586 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1530 913 MobiDBLite consensus disorder prediction 893 913 - -
Prci10g1530 913 Pfam Leucine rich repeat 397 453 IPR001611 GO:0005515
Prci10g1530 913 ProSitePatterns Protein kinases ATP-binding region signature. 590 612 IPR017441 GO:0005524
Prci10g1530 913 Pfam Malectin-like domain 28 336 IPR024788 -
Prci10g1530 913 ProSitePatterns Serine/Threonine protein kinases active-site signature. 706 718 IPR008271 GO:0004672|GO:0006468
Prci10g1530 913 Pfam Protein tyrosine and serine/threonine kinase 587 803 IPR001245 GO:0004672|GO:0006468
Prci10g1530 913 Gene3D - 184 337 - -
Prci10g1530 913 Gene3D Ribonuclease Inhibitor 344 498 IPR032675 -
Prci10g1530 913 SUPERFAMILY Protein kinase-like (PK-like) 565 856 IPR011009 -
Prci10g1530 913 CDD STKc_IRAK 590 857 - -
Prci10g1530 913 MobiDBLite consensus disorder prediction 887 913 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1530 Prci-Chr10 10531133 10538081 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1530 24 863 Receptor kinase-like Gene Family AT1G67720 34.364 1.37e-131 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci10g1530 Malectin_like 1.8e-47 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1530 - - gmx:100781986 1173.3