Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1529 ATGGAGGAATTGGATAACCACAGTTTAAGACTTGTTATGGTTTACATCCTTTGCTTTCTCCTGTTTATCGGATCAGCTTCTGCAAGTGAAGATTTTGTGAGCATAGCATGCTGTGCTGATTCAGATTATACAGATCCAAAGACCTCGGTAAATTACACATCAGATTTTAGTTTCTACCCAGATAAAACAAGTTGCTTAGACACAACCAAGCCTGTGGGGAACAACGCAGGCCGTGGAAAAGCTAGAGTTTTTTATATAGATGAAGGAAAAAGATGTTACAACTTGCCAACAGCTGAGAATCAAGTGTATCTGCTAAGGGGCACATTTCCATCTGATGAATCTCTAAGTAAATCTCCGAATTCCTCTTTTGATGTTACAATTGGGGTTACCTCATTAGGTGTAGTAGAGAAACCACCTCAGGACATGGAATTACTTGAAGGAATTTTCAGAGCTAAGAAGAATTATATAGATTTCTGCTTAGTGAAAGACGAGGGAAGTCCATACATTTCACTGATTGAACTGAGGCCACTGGATGAAGAGTACCTACAGGATTCCCCTTCTAGTGCCCTGAAACTGATCGCAAGAAATAACCTAGAGGCCAACGGAGATGACATCAGGCACCCACTTGACAAAACTGACAGAATCTGGAAAGCTACTTCAAGTCCTTCATCTTCTCCCATAACATCATCCAATGCGAGCATTTCCAGTCACAATGCTAATTCGACACCTCCTCTTCAAGTCCTACGAACCGCTCTTACGCATCCTGAGAAACTGGAATTCATCCACAACGGCCTCGACCGTGGGAATTCCAAATACCGTGTGTTTCTCCACTTTCTTGAATTGAATAAGAGTGTCACACTAGGCAAAAGAGTGTTTGATATCTACGTAAACGGTGTCATCAAAGAGCCGAAGTTTGACATATTTGCTGGCGGATCGAACTATAGACAAGCTGTTTTGAACTTCTCGGCAAATGGTTCGCTGAATCTAACCTTGAGCAAGGCCTCTGGGTCTGAGAATGGACCGCTTTGTAATGCATACGAGATCCTGAAGTTTATCCCTTGGATGCAGGAGGCCAACCAAACAGACACGGAAGTGATGTTGAAGGTGAGAGAGCAATTGCTAGAGAATAACAGAGGAAATGAAGAACTGGAGCGTTGGAGTGGAGACCCATGCATACTGTTCCCTGGGCAACATGTAGTATGCGACCGTTTAGGTGGTCAACTTGTTATCACTAAACTGGATCTTTCGTCAAGTAATCTCCGAGGACCGATTCCTTCCAGTATCACTGAGTTGTCCAACTTGAGAATATTGAACCTGAGCTATAATAGCTTAACTGGGAACATTCCCTTATTTCCACATTCATCTTTGCTTACATCAATAGATCTGAGCCACAATGATCTCACAGGATCTCTTCCATGGAGCCTTCCCTTACTGCCACAACTAAAGTCCTTGTATTTTGGCTGCAATAAGCGCATGAACAAGGAGGTTCCAACTTCCTTGAACAGCTTAGCCAATACAGATTATGGAAGCTGTAAAGCTGGAGAAGCAGGAATTTCCCAAAAGCACATCATCATTGGAACCGTTACATGTGGATTGCTCCTGATTATTTTGGCTATTGGAATTCTTTTGGGTTGCAATAAAAGAGGAAAATTAGTCCCCTGGGGAACATCTGATGAAAAGGGATACCCAAGAACCACAAATTTGATTTTCTCTTTGAGCGGTAAAGATGATTTCATCTTTAAGTCGGTATCCATTCAAACATTCACCCTGGAATACATAGAGGCAGCCACCCAAAACTACAAAACTTTGATTGGTGAAGGAGGGTTTGGGTCTGTTTACCGTGGCACTCTAGAAGATGGCCAAGAAGTTGCAGTGAAGGTCCGTTCAGCCACATCAACTCAGGGAACTCGTGAGTTTGACAACGAGGTAAACTTGCTCTCTGCCATACGGCATGAGAACCTGGTGCCACTTATCGGTTACTGTTATGAAAGGGATCAACAAATTCTCGTGTATCCTTTCATGTCTAATGGTTCTTTACAAGATAGGCTTTATGGGGAACCCGCAAAGAGAAAACCATTAGACTGGCCAACCAGGTTATCTATTGCTCTTGGTGCAGGTCGAGGTTTGTCATATCTTCACACATTTTCGGGACGTTCTGTTATACACAGAGATGTGAAATCAAGCAATATTCTTCTGGATCACAGCATGTGTGCCAAGGTAGCAGACTTTGGTTTCTCAAAATATGCTCCCCAGGAAGGAGACAGTGGTGCTTCTCTTGAAGTAAGAGGAACGGCAGGATATATGGACCCTGAGTACTATACGACCCAGCAATTATCTGCAAAGAGTGATGTCTTTAGCTTTGGCATGGTTTTACTTGAAATTGTGAGTGGCCGGGAACCTCTCAACACGCAAAGACCACGGAATGAGTGGAACTTGGTGGAATGGGCTAAACCGTATATACGGGCGTCGAAGATCGATGAAATTGTGGATCCTAGCATCAAGGGAGGATATCATGCAGAGGCCATGTGGAGAGTAGTGGAAACAGCATTAGCGTGTATTGAACCATTCTCAGTACATCGACCAAGCATGGGTGATATTGTCCGTGAGTTGGAGGATGCTCTGATTATAGAAAACAATGCATCAGAATACATGAAGTCCATAGAAAGCCTTGGAGGATCAAATCGCAACTCCATTGTCATGGAGAAGAAGATGGCAGCCCCATCTCCATCAACAACAGAATCAGCCATCTCGCCCAAAACCTTGTCCCACCCACAGCCCAGATAG 2784 0.4361 MEELDNHSLRLVMVYILCFLLFIGSASASEDFVSIACCADSDYTDPKTSVNYTSDFSFYPDKTSCLDTTKPVGNNAGRGKARVFYIDEGKRCYNLPTAENQVYLLRGTFPSDESLSKSPNSSFDVTIGVTSLGVVEKPPQDMELLEGIFRAKKNYIDFCLVKDEGSPYISLIELRPLDEEYLQDSPSSALKLIARNNLEANGDDIRHPLDKTDRIWKATSSPSSSPITSSNASISSHNANSTPPLQVLRTALTHPEKLEFIHNGLDRGNSKYRVFLHFLELNKSVTLGKRVFDIYVNGVIKEPKFDIFAGGSNYRQAVLNFSANGSLNLTLSKASGSENGPLCNAYEILKFIPWMQEANQTDTEVMLKVREQLLENNRGNEELERWSGDPCILFPGQHVVCDRLGGQLVITKLDLSSSNLRGPIPSSITELSNLRILNLSYNSLTGNIPLFPHSSLLTSIDLSHNDLTGSLPWSLPLLPQLKSLYFGCNKRMNKEVPTSLNSLANTDYGSCKAGEAGISQKHIIIGTVTCGLLLIILAIGILLGCNKRGKLVPWGTSDEKGYPRTTNLIFSLSGKDDFIFKSVSIQTFTLEYIEAATQNYKTLIGEGGFGSVYRGTLEDGQEVAVKVRSATSTQGTREFDNEVNLLSAIRHENLVPLIGYCYERDQQILVYPFMSNGSLQDRLYGEPAKRKPLDWPTRLSIALGAGRGLSYLHTFSGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSGASLEVRGTAGYMDPEYYTTQQLSAKSDVFSFGMVLLEIVSGREPLNTQRPRNEWNLVEWAKPYIRASKIDEIVDPSIKGGYHAEAMWRVVETALACIEPFSVHRPSMGDIVRELEDALIIENNASEYMKSIESLGGSNRNSIVMEKKMAAPSPSTTESAISPKTLSHPQPR 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1529 927 FunFam Nodulation receptor kinase 564 673 - -
Prci10g1529 927 SUPERFAMILY Protein kinase-like (PK-like) 579 870 IPR011009 -
Prci10g1529 927 ProSiteProfiles Protein kinase domain profile. 598 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1529 927 Gene3D Ribonuclease Inhibitor 358 512 IPR032675 -
Prci10g1529 927 Pfam Protein tyrosine and serine/threonine kinase 601 817 IPR001245 GO:0004672|GO:0006468
Prci10g1529 927 ProSitePatterns Protein kinases ATP-binding region signature. 604 626 IPR017441 GO:0005524
Prci10g1529 927 SMART serkin_6 600 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1529 927 MobiDBLite consensus disorder prediction 901 927 - -
Prci10g1529 927 Pfam Leucine rich repeat 411 467 IPR001611 GO:0005515
Prci10g1529 927 SUPERFAMILY L domain-like 395 504 - -
Prci10g1529 927 MobiDBLite consensus disorder prediction 216 241 - -
Prci10g1529 927 CDD STKc_IRAK 604 871 - -
Prci10g1529 927 Gene3D Phosphorylase Kinase; domain 1 570 673 - -
Prci10g1529 927 PANTHER OS07G0107800 PROTEIN-RELATED 33 877 - -
Prci10g1529 927 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 674 883 - -
Prci10g1529 927 Gene3D - 198 351 - -
Prci10g1529 927 MobiDBLite consensus disorder prediction 907 927 - -
Prci10g1529 927 Pfam Malectin-like domain 40 350 IPR024788 -
Prci10g1529 927 Gene3D Transferase(Phosphotransferase) domain 1 674 890 - -
Prci10g1529 927 ProSiteProfiles Leucine-rich repeat profile. 433 455 IPR001611 GO:0005515
Prci10g1529 927 ProSitePatterns Serine/Threonine protein kinases active-site signature. 720 732 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1529 Prci-Chr10 10531133 10538081 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1529 9 877 Receptor kinase-like Gene Family AT1G67720 34.479 2.42e-138 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci10g1529 Malectin_like 5e-49 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1529 - - gmx:100781986 1203.35