LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci10g1528	ATGGAGGAATTGGATAACCACAGTTTAAGACTTGTTATGGTTTACATCCTTTGCTTTCTCCTGTTTATCGGATCAGCTTCTGCAAGTGAAGATTTTGTGAGCATAGCATGCTGTGCTGATTCAGATTATACAGATCCAAAGACCTCGGTAAATTACACATCAGATTTTAGTTTCTACCCAGATAAAACAAGTTGCTTAGACACAACCAAGCCTGTGGGGAACAACGCAGGCCGTGGAAAAGCTAGAGTTTTTTATATAGATGAAGGAAAAAGATGTTACAACTTGCCAACAGCTGAGAATCAAGTGTATCTGCTAAGGGGCACATTTCCATCTGATGAATCTCTAAGTAAATCTCCGAATTCCTCTTTTGATGTTACAATTGGGGTTACCTCATTAGGTGTAGTAGAGAAACCACCTCAGGACATGGAATTACTTGAAGGAATTTTCAGAGCTAAGAAGAATTATATAGATTTCTGCTTAGTGAAAGACGAGGGAAGTCCATACATTTCACTGATTGAACTGAGGCCACTGGATGAAGAGTACCTACAGGATTCCCCTTCTAGTGCCCTGAAACTGATCGCAAGAAATAACCTAGAGGCCAACGGAGATGACATCAGGCACCCACTTGACAAAACTGACAGAATCTGGAAAGCTACTTCAAGTCCTTCATCTTCTCCCATAACATCATCCAATGCGAGCATTTCCAGTCACAATGCTAATTCGACACCTCCTCTTCAAGTCCTACGAACCGCTCTTACGCATCCTGAGAAACTGGAATTCATCCACAACGGCCTCGACCGTGGGAATTCCAAATACCGTGTGTTTCTCCACTTTCTTGAATTGAATAAGAGTGTCACACTAGGCAAAAGAGTGTTTGATATCTACGTAAACGGTGTCATCAAAGAGCCGAAGTTTGACATATTTGCTGGCGGATCGAACTATAGACAAGCTGTTTTGAACTTCTCGGCAAATGGTTCGCTGAATCTAACCTTGAGCAAGGCCTCTGGGTCTGAGAATGGACCGCTTTGTAATGCATACGAGATCCTGAAGTTTATCCCTTGGATGCAGGAGGCCAACCAAACAGACACGGAAGTGATGTTGAAGGTGAGAGAGCAATTGCTAGAGAATAACAGAGGAAATGAAGAACTGGAGCGTTGGAGTGGAGACCCATGCATACTGTTCCCTGGGCAACATGTAGTATGCGACCGTTTAGGTGGTCAACTTGTTATCACTAAACTGGATCTTTCGTCAAGTAATCTCCGAGGACCGATTCCTTCCAGTATCACTGAGTTGTCCAACTTGAGAATATTGAACCTGAGCTATAATAGCTTAACTGGGAACATTCCCTTATTTCCACATTCATCTTTGCTTACATCAATAGATCTGAGCCACAATGATCTCACAGGATCTCTTCCATGGAGCCTTCCCTTACTGCCACAACTAAAGTCCTTGTATTTTGGCTGCAATAAGCGCATGAACAAGGAGGTTCCAACTTCCTTGAACAGCTTAGCCAATACAGATTATGGAAGCTGTAAAGCTGGAGAAGCAGGAATTTCCCAAAAGCACATCATCATTGGAACCGTTACATGTGGATTGCTCCTGATTATTTTGGCTATTGGAATTCTTTTGGGTTGCAATAAAAGAGGAAAATTAGTCCCCTGGGGAACATCTGATGAAAAGGGATACCCAAGAACCACAAATTTGATTTTCTCTTTGAGCGGTAAAGATGATTTCATCTTTAAGTCGGTATCCATTCAAACATTCACCCTGGAATACATAGAGGCAGCCACCCAAAACTACAAAACTTTGATTGGTGAAGGAGGGTTTGGGTCTGTTTACCGTGGCACTCTAGAAGATGGCCAAGAAGTTGCAGTGAAGGTCCGTTCAGCCACATCAACTCAGGGAACTCGTGAGTTTGACAACGAGGTAAACTTGCTCTCTGCCATACGGCATGAGAACCTGGTGCCACTTATCGGTTACTGTTATGAAAGGGATCAACAAATTCTCGTGTATCCTTTCATGTCTAATGGTTCTTTACAAGATAGGCTTTATGGGGAACCCGCAAAGAGAAAACCATTAGACTGGCCAACCAGGTTATCTATTGCTCTTGGTGCAGGTCGAGGTTTGTCATATCTTCACACATTTTCGGGACGTTCTGTTATACACAGAGATGTGAAATCAAGCAATATTCTTCTGGATCACAGCATGTGTGCCAAGGTAGCAGACTTTGGTTTCTCAAAATATGCTCCCCAGGAAGGAGACAGTGGTGCTTCTCTTGAAGTAAGAGGAACGGCAGGATATATGGACCCTGAGTACTATACGACCCAGCAATTATCTGCAAAGAGTGATGTCTTTAGCTTTGGCATGGTTTTACTTGAAATTGTGAGTGGCCGGGAACCTCTCAACACGCAAAGACCACGGAATGAGTGGAACTTGGTGGAATGGGTATGGTGCAAGTACAAAACGACTTCATCATTTGCCACGCTAAACCGTATATACGGGCGTCGAAGATCGATGAAATTGTGGATCCTAGCATCAAGGGAGGATATCATGCAGAGGCCATGTGGAGAGTAG	2574	0.4336	MEELDNHSLRLVMVYILCFLLFIGSASASEDFVSIACCADSDYTDPKTSVNYTSDFSFYPDKTSCLDTTKPVGNNAGRGKARVFYIDEGKRCYNLPTAENQVYLLRGTFPSDESLSKSPNSSFDVTIGVTSLGVVEKPPQDMELLEGIFRAKKNYIDFCLVKDEGSPYISLIELRPLDEEYLQDSPSSALKLIARNNLEANGDDIRHPLDKTDRIWKATSSPSSSPITSSNASISSHNANSTPPLQVLRTALTHPEKLEFIHNGLDRGNSKYRVFLHFLELNKSVTLGKRVFDIYVNGVIKEPKFDIFAGGSNYRQAVLNFSANGSLNLTLSKASGSENGPLCNAYEILKFIPWMQEANQTDTEVMLKVREQLLENNRGNEELERWSGDPCILFPGQHVVCDRLGGQLVITKLDLSSSNLRGPIPSSITELSNLRILNLSYNSLTGNIPLFPHSSLLTSIDLSHNDLTGSLPWSLPLLPQLKSLYFGCNKRMNKEVPTSLNSLANTDYGSCKAGEAGISQKHIIIGTVTCGLLLIILAIGILLGCNKRGKLVPWGTSDEKGYPRTTNLIFSLSGKDDFIFKSVSIQTFTLEYIEAATQNYKTLIGEGGFGSVYRGTLEDGQEVAVKVRSATSTQGTREFDNEVNLLSAIRHENLVPLIGYCYERDQQILVYPFMSNGSLQDRLYGEPAKRKPLDWPTRLSIALGAGRGLSYLHTFSGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSGASLEVRGTAGYMDPEYYTTQQLSAKSDVFSFGMVLLEIVSGREPLNTQRPRNEWNLVEWVWCKYKTTSSFATLNRIYGRRRSMKLWILASREDIMQRPCGE	857

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci10g1528	857	ProSiteProfiles	Protein kinase domain profile.	598	857	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci10g1528	857	SUPERFAMILY	Protein kinase-like (PK-like)	579	824	IPR011009	-
	Prci10g1528	857	SMART	serkin_6	600	856	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci10g1528	857	ProSitePatterns	Protein kinases ATP-binding region signature.	604	626	IPR017441	GO:0005524
	Prci10g1528	857	PANTHER	OS07G0107800 PROTEIN-RELATED	33	817	-	-
	Prci10g1528	857	SUPERFAMILY	L domain-like	395	504	-	-
	Prci10g1528	857	FunFam	Nodulation receptor kinase	564	673	-	-
	Prci10g1528	857	Gene3D	-	198	351	-	-
	Prci10g1528	857	Pfam	Protein tyrosine and serine/threonine kinase	601	807	IPR001245	GO:0004672\|GO:0006468
	Prci10g1528	857	CDD	STKc_IRAK	604	816	-	-
	Prci10g1528	857	Gene3D	Ribonuclease Inhibitor	358	512	IPR032675	-
	Prci10g1528	857	MobiDBLite	consensus disorder prediction	216	241	-	-
	Prci10g1528	857	FunFam	Lectin-domain containing receptor kinase A4.3	674	841	-	-
	Prci10g1528	857	Gene3D	Transferase(Phosphotransferase) domain 1	674	854	-	-
	Prci10g1528	857	Pfam	Leucine rich repeat	411	467	IPR001611	GO:0005515
	Prci10g1528	857	ProSiteProfiles	Leucine-rich repeat profile.	433	455	IPR001611	GO:0005515
	Prci10g1528	857	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	720	732	IPR008271	GO:0004672\|GO:0006468
	Prci10g1528	857	Pfam	Malectin-like domain	40	350	IPR024788	-
	Prci10g1528	857	Gene3D	Phosphorylase Kinase; domain 1	570	673	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci10g1528	Prci-Chr10	10531131	10537497	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci10g1528	9	815	Receptor kinase-like Gene Family	AT1G67720	34.405	7.97e-122	389

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Prci10g1528		Malectin_like	4.3e-49	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci10g1528	-		-	gmx:100781986	1031.94