Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1527 ATGGCTCGTCAACCCAATATTATTATTCCCCGGCGTGATCATCATCATCATCATCAACAACAACAACAACAACAACAAGAGACTGTGATCGAGATCAAGAAATCCGTGAACTTCACAGGAGGGCTCGAGTTCTCAGGCCTGACCTACACAGTGACTAAGAAGAAGAAGGTTGATAGCAGCTGGGTGAAGGAGAACGTGGACTTGCTTCATGGCATTACTGGGTACGCACCAAAGGGTTGTATCACTGCAGTGATGGGTCCTAGTGGTGCAGGCAAGTCCACCTTCTTGGATGGTCTCGCTGGCAGAATTGCGAGTGGGAGCCTCAAGGGAAGGGTGTGTTTGGATGGCACAGATACAAACCCTACGTTGATCAAGAGAACTTCTGCTTATATCATGCAGGAAGATAGGCTCTTCCCAATGCTCACTGTGTATGAAACTTTCATGTTTGCTGCTGATTTTCGATTAGGTCCTCTTTCTCTTGCTGAAAAGAAGCAGAGAGTAGAGAAGCTCATTGAGCAGCTTGGCTTATCATCAACTCGAAACACGTACATCGGAGACGAAGGAACAAGAGGAGTGTCTGGCGGAGAGAGACGTCGAGTGTCCATCGGCGTCGACATCATCCACGGACCATCCCTTCTGTTTCTCGACGAGCCCACTTCCGGTCTGGACTCCACCAGCGCTCACAGCGTCATCGAGAAGGTCCACGACATCGCTCGAGGCGGCAGCACTGTCATCCTCACCATCCACCAGCCTTCCTCCAGAATCCAGCTCCTTCTCGACCACCTCATCATCCTTGCCAGAGGCCAACTCATGTTTCAGGGTTCCCCCAAAGACGTCGCTCTCCATCTGGGTCGCATGGGACGCAAAGTCCCCAAGGGAGAGAATCCAATTGAGCACCTCATTGATGTGGTTCAAGAGTATGATCAGTCTGAAGTCGGTGTCGGAGCTCTTGCTGAGTTCGCCCGCACTGGAGTGAAACCCCCTCCGTTGTCTGACCAGGAATTCTCCCTCTCCACCGTCGCACAGTCAACCCCAGGTCGAAACCCTCGCCACGAGGACCGTTCCATGGTCGATGAGTTTGATCACAGTCTGAGAAGCTCCCATACACCCAAGTCCCGGAATACCGGCAATAGTGTATTGTTTCAAAAGCTTACACCTTCCCGCTTTAAGAATGAACATAGACTGCAAAATAATCCTTTACGTAATGCTTCGCCTGGGTACTATACGTACTCGAACGAGATCCTCCCAGCAACACCAACGCCACATAGCAGTGACTACACAGTGAATGAGAACGACTATATGACTCCTCCGGATGGCATGCTAAAGCATCTGGGTCCGAAATTTGCGAACTCTTTCATGGCGGAGACATGGATTCTGATGAGGCGGAACTTCAAAAACATCCGCAGAACACCTGAGCTTTTTCTCTCCAGATTGATGGTGCTCACGGTGATGGGCGTCATGATGGCCACCATGTTCAGGAACCCTAAAGAAAACGCGCAAGGAATCACCAACCGCCTCAGCTTCTTCATCTTCACTGTCTGTCTCTTCTTCTTCTCCTCCAACGACGCCGTGCCGGCATTCATCCAAGAACGATTCATTTTCATCAGAGAAACTTCCCACAATGCCTATCGAGCTTCCTCCTACACCATCGCCGGCATAATCACCCACACGCCTTTTCTTGTTCTGCAAGCTTCCGTCTACGCCATCATCGTCTGGTTTGCTTTGAAGCTGCAAGGCCCTTTTCTGTACTTCGTGCTGGTTCTCTTCGTTTCTCTCCTCTCCACAAACTCGTTTGTTGTTTTTGTGAGCTCGGTGGTCCCGAACTACATACTGGGTTATGCTGCTGTTATCGCTTTCACTGCTTTGTTCTTCTTGTTCTGTGGCTACTTCTTGAGCAGCAAGGATATTCCTATCTATTGGCGTTGGATGAACAAGATTTCGACCATGACTTATCCTTATGAGGGGCTTTTGATCAACCAGTATCGGAACTCAGATGTGTTTGGATCAAGCCTGGACGGGATAGATATTACAGGTTTTGATATCTTGAACAGTCTTCATATAAGTACTGATTCGTTTAGGAAGTGGGAAAATGTGATTATAATGTTGTTCTGGGCCGTCCTATATAGGATTTTGTTTTACTTGGTCCTTCGCTTTGCTTCTAAAAACCAGAGGTCGTAG 2178 0.489 MARQPNIIIPRRDHHHHHQQQQQQQQETVIEIKKSVNFTGGLEFSGLTYTVTKKKKVDSSWVKENVDLLHGITGYAPKGCITAVMGPSGAGKSTFLDGLAGRIASGSLKGRVCLDGTDTNPTLIKRTSAYIMQEDRLFPMLTVYETFMFAADFRLGPLSLAEKKQRVEKLIEQLGLSSTRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVIEKVHDIARGGSTVILTIHQPSSRIQLLLDHLIILARGQLMFQGSPKDVALHLGRMGRKVPKGENPIEHLIDVVQEYDQSEVGVGALAEFARTGVKPPPLSDQEFSLSTVAQSTPGRNPRHEDRSMVDEFDHSLRSSHTPKSRNTGNSVLFQKLTPSRFKNEHRLQNNPLRNASPGYYTYSNEILPATPTPHSSDYTVNENDYMTPPDGMLKHLGPKFANSFMAETWILMRRNFKNIRRTPELFLSRLMVLTVMGVMMATMFRNPKENAQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASSYTIAGIITHTPFLVLQASVYAIIVWFALKLQGPFLYFVLVLFVSLLSTNSFVVFVSSVVPNYILGYAAVIAFTALFFLFCGYFLSSKDIPIYWRWMNKISTMTYPYEGLLINQYRNSDVFGSSLDGIDITGFDILNSLHISTDSFRKWENVIIMLFWAVLYRILFYLVLRFASKNQRS 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1527 725 ProSitePatterns ABC transporters family signature. 192 206 IPR017871 GO:0005524|GO:0016887
Prci10g1527 725 Pfam ABC transporter 70 220 IPR003439 GO:0005524
Prci10g1527 725 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 292 IPR003439 GO:0005524
Prci10g1527 725 Pfam ABC-2 type transporter 249 306 IPR043926 GO:0140359
Prci10g1527 725 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 282 IPR027417 -
Prci10g1527 725 MobiDBLite consensus disorder prediction 332 346 - -
Prci10g1527 725 MobiDBLite consensus disorder prediction 328 354 - -
Prci10g1527 725 Pfam ABC-2 type transporter 456 661 IPR013525 GO:0016020|GO:0140359
Prci10g1527 725 CDD ABCG_EPDR 42 274 - -
Prci10g1527 725 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 20 713 - -
Prci10g1527 725 FunFam ABC transporter G family member 6 52 290 - -
Prci10g1527 725 SMART AAA_5 78 276 IPR003593 GO:0016887
Prci10g1527 725 Gene3D - 42 286 IPR027417 -
Prci10g1527 725 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1527 Prci-Chr10 10523748 10526907 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1527 37 374 Calmodulin-binding Proteins AT2G36910 26.087 1.17e-13 73.2