Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1485 ATGGCCATCGAGACCCGCGACACCACTGTCATGGAAATCAAGCCCAAGAACAGGAGAATCATGGGTGCTGGAGGTCCTGATGACGAGGACAACAGGTGGCCGCCATGGTTGAAGCCTCTGCTCAAAGAAAGCTTCTTCGTTCAATGCAAGGTTCACGCTGATTCACACAAGAGCGAATGCAATATGTATTGCTTGGACTGTATGAACGGCGCACTCTGCTCCCTCTGCCTCGCTCACCACAGAGACCACCGTGCTATACAGATAAGGAGGTCGTCTTACCACGATGTGATTAGGGTGAATGAGATTCAGAAGGTGCTCGACATATCCGGCGTGCAGACCTACATTATCAACAGCGCGAGGGTGGTGTTCCTGAACGAGAGGCCTCAGCCTAGGCCCGGTAAGGGCGTCACCAACACTTGCGAAGTCTGCGAGCGTAGCCTCCTCGATTCCTATCGATTCTGTTCTCTGGGTTGCAAGATTGTGGGGACATCGAGGGATTTCCAGAAGAGAAGGTCGGCGGCATTGGCATCGGAGTCGGAGGATTCATACAGCAGCAGCAGCAGCCACAGCCGGCTGAAGAACAGTAAAGTGCAGAGCTTCACGCCGTCAACACCACCGCCGACTTCAGTGAGTTACAGAACGGCCAAGAGAAGAAAGGGAATACCTCACAGAGCCCCGATGGGAGGACTAATCATAGAATACTAG 705 0.5333 MAIETRDTTVMEIKPKNRRIMGAGGPDDEDNRWPPWLKPLLKESFFVQCKVHADSHKSECNMYCLDCMNGALCSLCLAHHRDHRAIQIRRSSYHDVIRVNEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSRDFQKRRSAALASESEDSYSSSSSHSRLKNSKVQSFTPSTPPPTSVSYRTAKRRKGIPHRAPMGGLIIEY 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1485 234 MobiDBLite consensus disorder prediction 178 211 - -
Prci10g1485 234 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 27 227 - -
Prci10g1485 234 Pfam PLATZ transcription factor 89 160 IPR006734 -
Prci10g1485 234 MobiDBLite consensus disorder prediction 178 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1485 Prci-Chr10 10075423 10077376 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Prci10g1485 PLATZ 3.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1485 - - gmx:100797900 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1485 10 10075423 10077376 Prci10g1485 10 10075423 10077376 ECH